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Add CV build system: LaTeX parser and build script
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‎documents/JRM_CV.html‎

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<!DOCTYPE html>
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<html lang="en">
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<head>
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<meta charset="UTF-8">
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<meta name="viewport" content="width=device-width, initial-scale=1.0">
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<title>Jeremy R. Manning, Ph.D. - Curriculum Vitae</title>
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<link rel="stylesheet" href="../css/cv.css">
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</head>
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<body>
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<div class="cv-download-bar">
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<a href="JRM_CV.pdf" class="download-button" download>Download CV as PDF</a>
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</div>
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<div class="cv-content">
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<header class="cv-header">
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<h1>Jeremy R. Manning, <span class="small-caps">Ph.D.</span></h1>
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<div class="contact-info">
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<p>Director, Contextual Dynamics Laboratory</p>
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<p>Department of Psychological and Brain Sciences</p>
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<p>Dartmouth College</p>
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<p><span class="small-caps">HB</span> 6207, Moore Hall</p>
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<p>Hanover, <span class="small-caps">NH</span> 03755</p>
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<p><span class="small-caps">U.S.A.</span></p>
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<p><span class="small-caps">Email</span>: <a href="mailto:jeremy.r.manning@dartmouth.edu" target="_blank">jeremy.r.manning@dartmouth.edu</a></p>
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<p><span class="small-caps">Phone</span>: <a href="tel:6036462777" target="_blank">603.646.2777</a></p>
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<p><span class="small-caps">URL</span>:
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<a href="http://www.context-lab.com" target="_blank">http://www.context-lab.com</a></p>
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</div>
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</header>
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<section id="employment">
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<h2>Employment</h2>
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<em>Associate Professor</em>,
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<strong>Dartmouth College</strong>, Hanover, NH (2024 – )<br>
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<p>Department of Psychological and Brain Sciences <br></p>
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<p>Additional affiliation: Cognitive Science<br></p>
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<p>Tenured: 2024<br></p>
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<em>Assistant Professor</em>,
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<strong>Dartmouth College</strong>, Hanover, NH (2015 – 2024)<br>
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<p>Department of Psychological and Brain Sciences <br></p>
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<p>Additional affiliation: Cognitive Science<br></p>
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<p>Reappointed: 2018<br></p>
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<em>Postdoctoral Research
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Associate</em>, <strong>Princeton University</strong>, Princeton, NJ (2011 – 2015)<br>
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<p>Princeton Neuroscience
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Institute and Department of Computer Science<br></p>
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<p>Advisors: Kenneth Norman, <span class="small-caps">Ph.D.</span> and David Blei, <span class="small-caps">Ph.D.</span></p>
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</section>
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<section id="education">
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<h2>Education</h2>
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<span class="small-caps">Ph.D.</span> in Neuroscience, <strong>University of Pennsylvania</strong>,
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Philadelphia, PA (2011)<br>
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<p>Advisor: Michael Kahana, <span class="small-caps">Ph.D.</span><br></p>
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<p>Dissertation: <em>Acquisition, storage, and
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retrieval in digital and biological brains</em><br></p>
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<span class="small-caps">B.S.</span> in Neuroscience (High honors, <em>Magna cum laude</em>), <strong>Brandeis University</strong>,
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Waltham, MA (2006)<br>
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<p>Advisor: Robert Sekuler, <span class="small-caps">Ph.D.</span><br></p>
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<p>Dissertation: <em>Modeling human spatial navigation using a
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degraded ideal navigator</em><br></p>
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<span class="small-caps">B.S.</span> in Computer Science (<em>Magna cum
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laude</em>), <strong>Brandeis University</strong>,
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Waltham, MA (2006)
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</section>
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<section id="grants-honors-and-awards-selected">
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<h2>Grants, honors, and awards (selected)</h2>
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<ol reversed start="20">
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<li>Linda B. and Kendrick R. Wilson III 1969 Fellowship (2024–2025)</li>
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<li>John M. Manley Huntington Award for Newly Tenured Faculty (2024)<br>
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Awarded to recently tenured Dartmouth faculty members who have an outstanding record of teaching and research</li>
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<li>CompX Faculty Grant (2024): Developing the next generation of multi-scale large language
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models<br>
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Award amount: $15,000; Role: PI</li>
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<li>NSF CAREER Award (2022): Mapping and enhancing the acquisition
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of conceptual knowledge using behavior, neural signals, and natural
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language processing models<br>
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Award amount: $881,612; Role: PI</li>
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<li>Elected member, Memory Disorders Research Society (2021)</li>
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<li>NIMH Grant (2021): Serotonin modulation of the development of
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neural circuits underlying reward processing and impulsivity in
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adolescents<br>
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Award amount: $568,974; Role: Co-I (PI: Katherine Nautiyal)</li>
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<li>NIH Grant Supplement (2019): Dissecting serotonergic and
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dopaminergic contributions to the neural circuits underlying impulsive
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behavior<br>
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Award amount: $93,190; Role: Co-I (PI: Katherine Nautiyal)</li>
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<li>National Institute on Drug Abuse Center for Technology and Behavioral Health Pilot Grant (2019): Linking
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mental health and exercise via remote sensing<br>
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Award amount: $20,000; Role: Co-PI (PI: David Bucci; Co-PI: Lorie
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Loeb)</li>
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<li>Dartmouth Junior Faculty Fellowship (2018)</li>
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<li>Walter and Constance Burke Research Initiation Award (2018)<br>
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Award amount: $25,000; Role: PI</li>
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<li>DARPA Grant: Memory Enhancement with Modeling (MEM; 2018)<br>
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Award amount: $55,558; Role: PI (sub-award of DARPA RAM
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N66001-14-2-4-032)</li>
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<li>i-CORPS Pilot Grant: Developing a mobile device for estimating
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dynamic attention states (2018).<br>
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Award amount: $3,000; Role: Co-PI (PI: Peter Tse)</li>
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<li>Diamond Research Development Award (2017): Improving memory and context reinstatement at perceptual event boundaries<br>
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Award amount: $199,997; Role: Co-PI (PI: Barbara Jobst)</li>
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<li>Dartmouth Leslie Center for the Humanities award for developing a
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course incorporating the theme of "revolution" (2017; for
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<em>Storytelling with Data; PSYC 81.06</em>).<br>
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Award amount: $5,000;
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Role: Course Instructor</li>
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<li>Social Impact Practicum (2017; for <em>Storytelling with Data; PSYC
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81.06</em>)<br>
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Award amount: $2,000; Role: Course Instructor</li>
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<li>Young Minds and Brains (2017): The impact of exercise on attention, memory,
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and stress<br>
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Award amount: $100,000; Role: PI (with David Bucci, Co-PI)</li>
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<li>NSF EPSCoR Grant (2016): The neural basis of attention<br>
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Award
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amount: $6,000,000; Role: Co-I (PI: Peter Tse)</li>
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<li>NIMH Ruth L. Kirshstein National Research Service Award for an
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Individual Predoctoral Fellowship (2010): The neural representation of
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context and its role in free recall<br>
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Award amount: $57,762; Role:
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PI</li>
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<li>NIH Computational Neuroscience Training Grant (2008)<br>
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Role: Trainee</li>
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<li>NIH Systems and Integrative Biology Training
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Grant (2006)<br>
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Role: Trainee</li>
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</ol>
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</section>
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<section id="publications">
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<h2>Publications</h2>
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<div class="subsection" id="book-chapters">
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<h3>Book chapters</h3>
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<p>\end{etaremune}</p>
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</div>
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</section>
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<section id="invited-talks-selected">
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<h2>Invited talks (selected)</h2>
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<div class="two-column-list"><ol reversed start="42">
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<li>Generative Episodic Memory: Constructing Scenarios of the Past (Keynote Speaker, 2025)</li>
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<li>Brandeis University (2025)</li>
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<li>University of Virginia (2024)</li>
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<li>University of Pennsylvania (2023)</li>
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<li>Cornell University (2023)</li>
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<li>Boston University (2023)</li>
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<li>Harvard University (2022)</li>
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<li>University of California, Irvine (2022)</li>
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<li>Ruhr Universität Bochum (2022)</li>
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<li>Microsoft Research (2022)</li>
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<li>Carnegie Mellon University (2021)</li>
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<li>National Institutes of Mental Health (2021)</li>
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<li>Boston College (2020)</li>
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<li>Facebook Reality Labs (2020)</li>
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<li>University of California, Berkeley (2020)</li>
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<li>University of Oregon (2020)</li>
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<li>Context and Episodic Memory Symposium (2019)</li>
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<li>Society for Affective Science (2019)</li>
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<li>Uber (2019)</li>
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<li>Northeastern University (2018)</li>
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<li>Society for Neuroscience (2018)</li>
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<li>University of Pennsylvania (2018)</li>
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<li>Bard College (2017)</li>
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<li>Harvard University (2017)</li>
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<li>University of Texas at Austin (2017)</li>
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<li>Society for Neuroscience (2016)</li>
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<li>Brown University (2015)</li>
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<li>Columbia University (2015)</li>
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<li>Dartmouth College (2015)</li>
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<li>Georgetown University (2015)</li>
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<li>Johns Hopkins University (2015)</li>
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<li>Context and Episodic Memory Symposium (2014)</li>
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<li>Manhattan Area Memory Meeting (2014)</li>
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<li>Pattern Recognition in Neuroimaging (2014)</li>
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<li>Context and Episodic Memory Symposium (2013)</li>
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<li>University of Massachusetts, Amherst (2013)</li>
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<li>Dartmouth College (2013)</li>
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<li>Charles River Analytics (2012)</li>
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<li>Natick Soldier Systems Center (2012)</li>
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<li>Princeton University (2011)</li>
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<li>Society for Mathematical Psychology (2011)</li>
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<li>University of Pennsylvania (2011)</li>
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</ol>
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</div>
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</section>
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<section id="software-selected">
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<h2>Software (selected)</h2>
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<ol reversed start="20">
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<li><strong>Manning JR</strong>, <em>Manjunatha H</em>, Kording K (2023) Chatify: add an LLM-based chatbot "tutor" to
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Jupyter notebooks. <a href="https://github.com/ContextLab/chatify" target="_blank">GitHub</a>.</li>
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<li><em>Fitzpatrick PC</em>, <strong>Manning JR</strong> (2022) Davos: import
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Python packages, even if they aren't installed. <a href="https://github.com/ContextLab/davos" target="_blank">GitHub</a>.</li>
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<li><strong>Manning JR</strong> (2021) DataWrangler: format and clean
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data, with a special focus on applying natural language processing
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models to text data. <a href="https://github.com/ContextLab/data-wrangler" target="_blank">GitHub</a>.</li>
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<li><em>Owen LLW</em>, <em>Chang TH</em>, <strong>Manning JR</strong> (2019) Timecorr
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Toolbox: compute high-order correlations in multivariate timeseries
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data. <a href="https://github.com/ContextLab/timecorr" target="_blank">GitHub</a>.</li>
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<li><em>Owen LLW</em>, <span class="underline"><em>Heusser AC</em></span>, <strong>Manning JR</strong> (2018) SuperEEG Toolbox:
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infer full-brain activity patterns from a small(ish) number of ECoG electrodes using Gaussian process regression. <a href="https://github.com/ContextLab/superEEG" target="_blank">GitHub</a>.</li>
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<li>Capota M, Turek J, <em>Chen P-HC</em>, Zhu X, <strong>Manning JR</strong>, Sundaram N,
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Keller B, Wang Y, Shin YS (2017) BrainIAK: Brain Imaging Analysis Kit. <a href="http://brainiak.org/" target="_blank">brainiak.org</a>.</li>
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<li><span class="underline"><em>Heusser AC</em></span>, <em>Ziman K</em>, <span class="underline">Fitzpatrick PC</span>, <span class="underline">Field CE</span>, <strong>Manning JR</strong>
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(2017) AutoFR: a scalable verbal free recall experiment with
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automatic speech-to-text transcription.
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<a href="https://github.com/ContextLab/autoFR" target="_blank">GitHub</a>.</li>
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<li><span class="underline"><em>Heusser AC</em></span>, <span class="underline">Fitzpatrick PC</span>, <span class="underline">Field CE</span>, <em>Ziman K</em>, <strong>Manning JR</strong>
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(2017) Quail: a Python toolbox for analyzing and plotting free recall
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data. <a href="https://github.com/ContextLab/quail" target="_blank">GitHub</a>.</li>
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<li><span class="underline"><em>Heusser AC</em></span>, <em>Ziman K</em>, <em>Owen LLW</em>, <strong>Manning JR</strong> (2017)
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HyperTools: gain geometric insights into high-dimensional data (Python). <a href="https://github.com/ContextLab/hypertools" target="_blank">GitHub</a>.</li>
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<li><strong>Manning JR</strong> (2016) Hyperplot Tools: gain
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geometric insights into high-dimensional data (MATLAB).
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<a href="http://www.mathworks.com/matlabcentral/fileexchange/56623" target="_blank">MATLAB
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Central File Exchange: 56623</a>.</li>
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<li><strong>Manning JR</strong> (2014) Hierarchical Topographic
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Factor Analysis:
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<a href="https://app.box.com/s/elcxpst2n0q6elpuzndj" target="_blank">efficiently identify functional brain networks in fMRI data</a>.</li>
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<li><strong>Manning JR</strong> (2013) MATLAB Ipsum: generate filler text using MATLAB. <a href="http://www.mathworks.com/matlabcentral/fileexchange/43428" target="_blank">MATLAB
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Central File Exchange: 43428</a>.</li>
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<li><strong>Manning JR</strong> (2013) Easy resample: simple interface for
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interpolating or resampling a 1<span class="small-caps">d</span> signal. <a href="http://www.mathworks.com/matlabcentral/fileexchange/43320" target="_blank">MATLAB
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Central File Exchange: 43320</a>.</li>
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<li><strong>Manning JR</strong> (2012) Chuck Close-ify: automatically create
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artwork in Chuck Close's iconic style based on existing photographs. <a href="http://www.mathworks.com/matlabcentral/fileexchange/38770" target="_blank">MATLAB
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Central File Exchange: 38770</a>.</li>
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<li><strong>Manning JR</strong> (2012) Plot fMRI images: quick and easy method
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for generating 2<span class="small-caps">d</span> and 3<span class="small-caps">d</span> brain plots. <a href="http://www.mathworks.com/matlabcentral/fileexchange/36139" target="_blank">MATLAB Central File
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Exchange: 36139</a>.</li>
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<li><strong>Manning JR</strong> (2012) Generate synthetic fMRI data: generate
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synthetic data for testing fMRI analyses and models. <a href="http://www.mathworks.com/matlabcentral/fileexchange/36125" target="_blank">MATLAB Central File
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Exchange: 36125</a>.</li>
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<li><strong>Manning JR</strong> (2012) Sane pColor: create 2<span class="small-caps">d</span> images that
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don't look blurry in OS X's Preview PDF viewer. <a href="http://www.mathworks.com/matlabcentral/fileexchange/35601" target="_blank">MATLAB Central File
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Exchange: 35601</a>.</li>
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<li><strong>Manning JR</strong> (2012) Attach: MATLAB implementation of the attach
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function in R. <a href="http://www.mathworks.com/matlabcentral/fileexchange/35436" target="_blank">MATLAB Central File
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Exchange: 35436</a>.</li>
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<li><strong>Manning JR</strong> (2012) Get tight subplot handles: allows user to
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exert finer control over subplot spacing in MATLAB. <a href="http://www.mathworks.com/matlabcentral/fileexchange/35435" target="_blank">MATLAB Central File
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Exchange: 35435</a>.</li>
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<li><strong>Manning JR</strong> (2012) Slices: efficiently slice a tensor
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along the <span class="math">n<sup>th</sup></span> dimension. <a href="http://www.mathworks.com/matlabcentral/fileexchange/35439" target="_blank">MATLAB Central File
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Exchange: 35439</a>.</li>
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</ol>
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</section>
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<section id="teaching-and-instruction">
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<h2>Teaching and instruction</h2>
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<div class="subsection" id="open-courses-selected">
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<h3>Open courses (selected)</h3>
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<ol reversed start="7">
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<li><a href="https://github.com/ContextLab/experimental-psychology" target="_blank">Laboratory in Psychological Science</a>; doi.org/10.5281/zenodo.6596761</li>
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<li><a href="https://github.com/ContextLab/human-memory" target="_blank">Human
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Memory</a>; doi.org/10.5271/zenodo.5182787</li>
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<li><a href="https://github.com/ContextLab/cs-for-psych" target="_blank">Introduction to
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Programming for Psychological Scientists</a>; doi.org/10.5281/zenodo.5136795</li>
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<li><a href="https://naturalistic-data.org/content/intro.html" target="_blank">Naturalistic
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data analysis</a>; doi.org/10.5281/zenodo.3937849</li>
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<li><a href="https://github.com/ContextLab/storytelling-with-data" target="_blank">Storytelling
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with Data</a>; doi.org/10.5281/zenodo.5182774</li>
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<li><a href="http://mindsummerschool.org/" target="_blank">Methods in Neuroscience at Dartmouth Computational
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Summer School</a></li>
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<li><a href="https://github.com/ContextLab/computational-neuroscience" target="_blank">Computational Neuroscience</a>; doi.org/10.5281/zenodo.10235877</li>
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</ol>
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</div>
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<div class="subsection" id="dartmouth-college">
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<h3>Dartmouth College</h3>
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</div>
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<div class="subsection" id="mentorship-selected">
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<h3>Mentorship (selected)</h3>
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<ol reversed start="3">
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<li>Hung-Tu Chen (2024 – 2025; current position: Meta)</li>
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<li>Gina Notaro (2017 – 2018; current position: HRL Laboratories)</li>
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<li>Andrew Heusser (2016 – 2018; current position: PyMC Labs)</li>
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</ol>
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</div>
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<div class="subsection" id="brandeis-university">
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<h3>Brandeis University</h3>
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</div>
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</section>
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<section id="service">
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<h2>Service</h2>
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<div class="subsection" id="professional-organizations">
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<h3>Professional organizations</h3>
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<ol reversed start="5">
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<li>Dartmouth-Kalaniyot (2024 – ) Co-founder, Board member</li>
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<li>National Science Foundation (2023, 2024, 2025) Panel member</li>
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<li>NeuroMatch Academy (2021 – ) Developer and project mentor (computational neuroscience and deep learning tracks)</li>
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<li>Artificial Intelligence and Statistics (AISTATS; 2021 – 2024) Area
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chair (natural language processing and machine learning)</li>
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<li>Methods in Neuroscience at Dartmouth (MIND) Summer School (2017 – ) Co-founder</li>
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</ol>
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</div>
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<div class="subsection" id="dartmouth-committee-memberships">
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<h3>Dartmouth committee memberships</h3>
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<ol reversed start="6">
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<li>Social (Department Well-Being) Committee (2023–2024, 2024–2025)</li>
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<li>Undergraduate Committee (2021–2022, 2015–2016)</li>
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<li>Graduate Committee (2020–2021, 2016–2019)</li>
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<li>Cognitive Neuroscience Faculty Search Committee (2018)</li>
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<li>Molecular and Systems Biology Faculty Search Committee (2017)</li>
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<li>Cognitive Neuroscience Faculty Search Committee (2016)</li>
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</ol>
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</div>
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<div class="subsection" id="ad-hoc-reviewer">
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<h3>Ad-hoc reviewer</h3>
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<em>Advances in Cognitive Psychology</em>,
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<em>Agence Nationale de la Recherche</em>,
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<em>American Journal of Psychology</em>,
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<em>Cell Reports</em>,
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<em>Cerebral Cortex</em>,
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<em>Cognition</em>,
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<em>Cognition and Emotion</em>,
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<em>Cortex</em>,
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<em>Computational and Systems Neuroscience (Cosyne)</em>,
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<em>eLife</em>,
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<em>International Conference on Machine Learning (ICML)</em>,
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<em>International Joint Conference on Artificial Intelligence</em>,
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<em>International Journal of Social Research Methodology</em>,
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<em>Israel Science Foundation</em>,
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<em>Journal of Cognitive Psychology</em>,
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<em>Journal of Mathematical Psychology</em>,
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<em>National Science Foundation (USA)</em>,
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<em>Nature</em>,
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<em>Nature Communications</em>,
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<em>Nature Computational Science</em>,
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<em>Nature Human Behaviour</em>,
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<em>Neural Computation</em>,
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<em>NeuroImage</em>,
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<em>Neural Information Processing Systems (NeurIPS)</em>,
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<em>Neuropsychologia</em>,
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<em>PLoS Biology</em>,
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<em>PLoS Computational Biology</em>,
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<em>Proceedings of the National Academy of Sciences</em>,
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<em>Psychological Reports</em>,
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<em>Psychological Review</em>,
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<em>Psychonomic Bulletin and Review</em>,
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<em>Science</em>,
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<em>Scientific Data</em>,
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<em>Scientific Reports</em>,
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<em>Society for Artificial Intelligence and Statistics (AISTATS)</em>,
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<em>Swiss National Science Foundation</em>,
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<em>The Journal of Neuroscience</em>
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<p>\begin{center}
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{\scriptsize Last updated: \today}
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\end{center}</p>
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</div>
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</section>
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<footer class="cv-footer">
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<p>Last updated: <span id="last-updated"></span></p>
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<script>
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document.getElementById('last-updated').textContent = new Date().toLocaleDateString('en-US', {year: 'numeric', month: 'long', day: 'numeric'});
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</script>
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</footer>
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</div>
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</body>
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</html>

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