diff --git a/Script/PRONTO.py b/Script/PRONTO.py index 4f0f436..305af62 100755 --- a/Script/PRONTO.py +++ b/Script/PRONTO.py @@ -487,7 +487,7 @@ def get_patient_info_from_MTF_new(ipd_material_file,ipd_no,DNA_sampleID,RNA_samp else: ipd_consent = ipd_consent + "," + str(sheet_material.cell_value(r+2,c)) if(sheet_material.cell_value(r,10) == columns['comment'] and sheet_material.cell_value(r+2,10) != "" and str(sheet_material.cell_value(r+2,10)) != "0.0" and str(sheet_material.cell_value(r+2,10)) != "0"): - comments = str(sheet_material.cell_value(r+2,10)) + comments = str(sheet_material.cell_value(r+2,10)).replace("\n", " ") if(pathology_comment == ""): pathology_comment = DIT_number + ":" + comments else: @@ -511,7 +511,7 @@ def get_patient_info_from_MTF_new(ipd_material_file,ipd_no,DNA_sampleID,RNA_samp if(sheet_material.cell_value(r+2,9) != ""): sample_ID = sheet_material.cell_value(r+2,9) if(sheet_material.cell_value(r+2,10) != "" and str(sheet_material.cell_value(r+2,10)) != "0.0" and str(sheet_material.cell_value(r+2,10)) != "0"): - comments = str(sheet_material.cell_value(r+2,10)) + comments = str(sheet_material.cell_value(r+2,10)).replace("\n", " ") if(sample_info_comment == ""): sample_info_comment = "{}: {}".format(sample_ID, comments) else: