input table

[ngs-seqer]

What program do you recommend to get information for Protiler's "input table"?

[MDhewei]

There is no specific program to do that, if you have problem I can help you.

[ngs-seqer]

Could you let me know how to retrieve info in the "AA" column?

[MDhewei]

For each sgRNA, you will have the specific genomic targeting loci, and you also need the genomic locations of exons for the gene you target, with these two information, you can map the sgRNA to specific AA location of the protein.

[ngs-seqer]

If a sgRNA does not map to an exon, is it ok to leave it as a blank?

[MDhewei]

I think so, you can leave it blank or "NA"