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I think it would be helpful to have some how-tos for addressing common application problems in PEtab (in additional to the basic tutorial).
Some cases that come to mind:
- Dealing with relative measurements (-> scaling parameters)
- Batch effects (-> condition-specific observable/noise parameters)
- Use of multiple models and model-specific parameter values (v2: Clarification MultiModel format #622 (comment))
- ...
The simple cases can probably also be addressed in some FAQ section.
sebapersson