| #chr | start | end | a1 | a2 | variant_ID | gene_ID | event_ID | cs_coverage_0.95 | cs_coverage_0.7 | cs_coverage_0.5 | PIP | conditional_effect | context | resource | lfsr | z |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <int> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <int> | <dbl> | <chr> | <chr> | <chr> | <chr> | <dbl> |
| 1 | 903284 | 903285 | C | T | chr1:903285:T:C | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| 1 | 903351 | 903352 | A | G | chr1:903352:G:A | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| 1 | 903509 | 903510 | G | A | chr1:903510:A:G | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| 1 | 903535 | 903536 | T | A | chr1:903536:A:T | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| 1 | 904080 | 904081 | C | T | chr1:904081:T:C | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| 1 | 904114 | 904115 | T | G | chr1:904115:G:T | ENSG00000235169 | Knight_eQTL_brain_ENSG00000235169 | 0 | 0 | 0 | 0.04257485 | -0.842082669467583 | Knight_eQTL_brain | single_context | NA | NA |
| #chr | start | end | a1 | a2 | variant_ID | gene_ID | event_ID | cs_coverage_0.95 | cs_coverage_0.7 | cs_coverage_0.5 | PIP | conditional_effect | context | resource | lfsr | z |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <int> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <int> | <dbl> | <chr> | <chr> | <chr> | <chr> | <dbl> |
| max | min | chr |
|---|---|---|
| <int> | <int> | <int> |
| 58823796 | 58387188 | 15 |
| event_ID | n |
|---|---|
| <chr> | <int> |
| KnightADRC_mQTL | 4 |
| MSBB_mQTL | 2 |
| ROSMAP_snATAC_Kelis_Oli | 1 |
| region_id | #chr | start | end | TSS | LD_matrix_id | LD_sumstats_id | LD_sumstats_id_old | TADB_index | TADB_id | gene_start | gene_end | sliding_windows | gene_name |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <chr> | <chr> | <dbl> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <chr> | <chr> |
| ENSG00000178226 | chr16 | 28360000 | 3.4e+07 | 31150065 | chr16:26796952-29685831,chr16:29685831-46381513 | 16_26796952-29685831,16_29685831-46381513 | 16_26796952-29685831,16_29685831_46381513 | TADB_1165,TADB_1166 | chr16_27341433_34991551,chr16_30975802_46400000 | 31150066 | 31138926 | chr16:21437007-30613717,chr16:22388493-34991551,chr16:24031743-46400000,chr16:27341433-49746318,chr16:30975802-50968730 | PRSS36 |
| chr16:26796952-29685831 | chr16:29685831-46381513 |
| 16_26796952-29685831 | 16_29685831-46381513 |
| chr16_27341433_34991551 | chr16_30975802_46400000 |
| region_id | #chr | start | end | TSS | LD_matrix_id | LD_sumstats_id | LD_sumstats_id_old | TADB_index | TADB_id | gene_start | gene_end | sliding_windows | gene_name |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <chr> | <chr> | <dbl> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <chr> | <chr> |
| ENSG00000073921 | chr11 | 84957175 | 87360000 | 86069881 | chr11:84267999-86714492,chr11:86714492-89332148 | 11_84267999-86714492,11_86714492-89332148 | 11_84267999-86714492,11_86714492_89332148 | TADB_914,TADB_915,TADB_916,TADB_917,TADB_918 | chr11_80821272_86627922,chr11_82455012_86627922,chr11_82455012_86627922,chr11_82455012_88330052,chr11_86037843_91192894 | 86069882 | 85957175 | chr11:77324757-86627922,chr11:80552225-86627922,chr11:80821272-88330052,chr11:82455012-91192894,chr11:82455012-94812378,chr11:86037843-97507574 | PICALM |
| chr11:84267999-86714492 | chr11:86714492-89332148 |
| 11_84267999-86714492 | 11_86714492-89332148 |
| chr11_80821272_86627922 | chr11_82455012_86627922 | chr11_82455012_86627922 | chr11_82455012_88330052 | chr11_86037843_91192894 |
| region_id | #chr | start | end | TSS | LD_matrix_id | LD_sumstats_id | LD_sumstats_id_old | TADB_index | TADB_id | gene_start | gene_end | sliding_windows | gene_name |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <chr> | <chr> | <dbl> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <chr> | <chr> |
| ENSG00000138613 | chr15 | 62276017 | 65480000 | 63276017 | chr15:61125463-63051119,chr15:63051119-66680537 | 15_61125463-63051119,15_63051119-66680537 | 15_61125463-63051119,15_63051119_66680537 | TADB_1132,TADB_1133,TADB_1134 | chr15_58574103_63343138,chr15_60834681_64158021,chr15_61390525_66517704 | 63276018 | 63309126 | chr15:54171378-63343138,chr15:56375966-64158021,chr15:58574103-66517704,chr15:60834681-67685794,chr15:61390525-69257131,chr15:64234460-70062762,chr15:65293216-73640125 | APH1B |
| chr15:61125463-63051119 | chr15:63051119-66680537 |
| 15_61125463-63051119 | 15_63051119-66680537 |
| chr15_58574103_63343138 | chr15_60834681_64158021 | chr15_61390525_66517704 |
| #chr | start | end | a1 | a2 | variant_ID | gene_ID | event_ID | cs_coverage_0.95 | cs_coverage_0.7 | cs_coverage_0.5 | PIP | conditional_effect | context | resource | lfsr | z |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <int> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <int> | <dbl> | <chr> | <chr> | <chr> | <chr> | <dbl> |
| gene_id | #chr | start | end | gene_name |
|---|---|---|---|---|
| <chr> | <chr> | <int> | <int> | <chr> |
| ENSG00000138613 | chr15 | 63276017 | 63276018 | APH1B |
| #chr | start | end | a1 | a2 | variant_ID | gene_ID | event_ID | cs_coverage_0.95 | cs_coverage_0.7 | cs_coverage_0.5 | PIP | conditional_effect | context | resource | lfsr | z |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| <int> | <dbl> | <int> | <chr> | <chr> | <chr> | <chr> | <chr> | <int> | <int> | <int> | <dbl> | <chr> | <chr> | <chr> | <chr> | <dbl> |
| 15 | 62715303 | 62715304 | TCCAC | T | chr15:62715304:T:TCCAC | ENSG00000138613 | Knight_eQTL_brain_ENSG00000138613 | 0 | 0 | 0 | 0.07077818 | -2.83880038503487 | Knight_eQTL_brain | single_context | NA | NA |
| 15 | 62716681 | 62716682 | G | T | chr15:62716682:T:G | ENSG00000138613 | Knight_eQTL_brain_ENSG00000138613 | 0 | 0 | 0 | 0.08868290 | -2.80626618009896 | Knight_eQTL_brain | single_context | NA | NA |
| 15 | 63043899 | 63043900 | G | C | chr15:63043900:C:G | ENSG00000138613 | Knight_eQTL_brain_ENSG00000138613 | 0 | 0 | 0 | 0.07042229 | 0.17724115214956 | Knight_eQTL_brain | single_context | NA | NA |
| 15 | 63043899 | 63043900 | G | C | chr15:63043900:C:G | ENSG00000246922 | Knight_eQTL_brain_ENSG00000246922 | 0 | 0 | 0 | 0.02695403 | -0.289117619312279 | Knight_eQTL_brain | single_context | NA | NA |
| 15 | 63277702 | 63277703 | T | C | chr15:63277703:C:T | ENSG00000138613 | Knight_eQTL_brain_ENSG00000138613 | 0 | 0 | 0 | 0.03409678 | 0.119995981532138 | Knight_eQTL_brain | single_context | NA | NA |
| 15 | 63339624 | 63339625 | G | C | chr15:63339625:C:G | ENSG00000138613 | Knight_eQTL_brain_ENSG00000138613 | 0 | 0 | 0 | 0.07648977 | -0.179996177386249 | Knight_eQTL_brain | single_context | NA | NA |
| gene_id | #chr | start | end | gene_name | contexts |
|---|---|---|---|---|---|
| <chr> | <chr> | <int> | <int> | <chr> | <chr> |