From 9b51b745523b4969b699aa2904895237777df5f7 Mon Sep 17 00:00:00 2001 From: Thinh Nguyen Date: Wed, 10 Dec 2025 15:34:21 -0600 Subject: [PATCH] templates_ind, whitening_mat, whitening_mat_inv in "_kilosort_additional_files" --- element_array_ephys/readers/kilosort.py | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/element_array_ephys/readers/kilosort.py b/element_array_ephys/readers/kilosort.py index 96e7dd47..5e51519e 100644 --- a/element_array_ephys/readers/kilosort.py +++ b/element_array_ephys/readers/kilosort.py @@ -5,7 +5,7 @@ import numpy as np import re import logging -from .utils import convert_to_number +from element_array_ephys.readers.utils import convert_to_number log = logging.getLogger(__name__) @@ -22,9 +22,6 @@ class Kilosort: "spike_templates.npy", "spike_times.npy", "templates.npy", - "templates_ind.npy", - "whitening_mat.npy", - "whitening_mat_inv.npy", "spike_clusters.npy", ] @@ -35,6 +32,9 @@ class Kilosort: "cluster_KSLabel.tsv", "template_features.npy", "template_feature_ind.npy", + "templates_ind.npy", + "whitening_mat.npy", + "whitening_mat_inv.npy", ] kilosort_files = _kilosort_core_files + _kilosort_additional_files @@ -47,7 +47,7 @@ def __init__(self, kilosort_dir): self.validate() - params_filepath = kilosort_dir / "params.py" + params_filepath = self._kilosort_dir / "params.py" self._info = { "time_created": datetime.fromtimestamp(params_filepath.stat().st_ctime), "time_modified": datetime.fromtimestamp(params_filepath.stat().st_mtime),