Skip to content

ROIs could use reworking #2

@barrettMCW

Description

@barrettMCW

currently use skimage for turning omero ROIs into contours. It's pretty slow. We also have a broken mask function that was removed.

Actionables:

  • performant conversion from a given shape and minimal points (rectange, ellipse, polygon, etc) into contours.
  • performant conversion from a given contour (or shape definition?) into a mask.

drawing a given shape should be in a good spot thanks to pyvips svg drawing as seen in lavlab.imsuite.draw_shapes()

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions