installation issue

[himasai9711]

Im trying to install the library im facing issues with pip and source installation

im getting this error:

[Ganryuu]

This is a problem with the NumPy version, to fix this do the following:

Clone the repo first :
!git clone https://github.com/microsoft/genalog.git

Go to the folder of the repo and in the requirements.txt file change the version of Numpy ( for me I changed it to numpy==1.26.4)

Navigate to the folder with cd genalog

then just do pip install like this pip install -e .

and it will work .

[geeky-programer]

@Ganryuu Which python version did you use?
I am not able to use the same in python 3.10

[geeky-programer]

For future reference:
Python 3.9

Working requirements.txt for genalog
biopython==1.76 numpy==1.26.4 python-dotenv==0.11.0 requests==2.31.0 azure-core==1.10.0 azure-common==1.1.26 azure-storage-blob==12.3.1 tqdm==4.65.0 Jinja2==2.11.1 WeasyPrint==51 matplotlib==3.2.1 scikit-image==0.21.0 opencv-python==4.10.0.84 pandas==2.2.1 aiofiles==0.5.0 aiohttp==3.6.2

[FMontay]

New working requirements (Python 3.11.5) :

biopython==1.85
numpy==1.26.4
python-dotenv==0.11.0
requests==2.31.0
azure-core==1.10.0
azure-common==1.1.26
azure-storage-blob==12.3.1
tqdm==4.65.0
Jinja2==2.11.1
WeasyPrint==51
matplotlib==3.10.1
scikit-image==0.21.0
opencv-python==4.10.0.84
pandas==2.2.1
aiofiles==0.5.0
aiohttp==3.6.2

Basically reusing geeky-programmer's list, with the latest version of matplotlib and biopython at the moment.