From 7015168ec85d6dcac765194ab156ff3645a24b5d Mon Sep 17 00:00:00 2001
From: James Kent <jamesdkent21@gmail.com>
Date: Mon, 28 Apr 2025 12:22:48 -0500
Subject: [PATCH 1/3] debug python 3.9

---
 .github/workflows/testing.yml | 11 +++++++++++
 1 file changed, 11 insertions(+)

diff --git a/.github/workflows/testing.yml b/.github/workflows/testing.yml
index 9080614..8f90cc6 100644
--- a/.github/workflows/testing.yml
+++ b/.github/workflows/testing.yml
@@ -62,6 +62,17 @@ jobs:
       - name: "Install PyMARE"
         shell: bash {0}
         run: pip install -e .[tests,stan]
+      - name: "Debug info for Python 3.9"
+        if: ${{ matrix.python-version == '3.9' && matrix.os == 'ubuntu-latest' }}
+        run: |
+          python -c "import numpy; print(f'Numpy version: {numpy.__version__}')"
+          python -c "import sys; print(f'Python path: {sys.path}')"
+          pip freeze
+          pip check
+      - name: Setup tmate session for Python 3.9 debugging
+        if: ${{ matrix.python-version == '3.9' && matrix.os == 'ubuntu-latest' }}
+        uses: mxschmitt/action-tmate@v3
+        timeout-minutes: 45
       - name: "Run tests"
         shell: bash {0}
         run: python -m pytest --pyargs pymare --cov=pymare

From dda63c8b150874025deb6b3135164754b683766b Mon Sep 17 00:00:00 2001
From: James Kent <jamesdkent21@gmail.com>
Date: Mon, 28 Apr 2025 12:32:21 -0500
Subject: [PATCH 2/3] Revert "debug python 3.9"

This reverts commit 7015168ec85d6dcac765194ab156ff3645a24b5d.
---
 .github/workflows/testing.yml | 11 -----------
 1 file changed, 11 deletions(-)

diff --git a/.github/workflows/testing.yml b/.github/workflows/testing.yml
index 8f90cc6..9080614 100644
--- a/.github/workflows/testing.yml
+++ b/.github/workflows/testing.yml
@@ -62,17 +62,6 @@ jobs:
       - name: "Install PyMARE"
         shell: bash {0}
         run: pip install -e .[tests,stan]
-      - name: "Debug info for Python 3.9"
-        if: ${{ matrix.python-version == '3.9' && matrix.os == 'ubuntu-latest' }}
-        run: |
-          python -c "import numpy; print(f'Numpy version: {numpy.__version__}')"
-          python -c "import sys; print(f'Python path: {sys.path}')"
-          pip freeze
-          pip check
-      - name: Setup tmate session for Python 3.9 debugging
-        if: ${{ matrix.python-version == '3.9' && matrix.os == 'ubuntu-latest' }}
-        uses: mxschmitt/action-tmate@v3
-        timeout-minutes: 45
       - name: "Run tests"
         shell: bash {0}
         run: python -m pytest --pyargs pymare --cov=pymare

From 544c7b9443bcc7a09eb086991f45130d274b5280 Mon Sep 17 00:00:00 2001
From: James Kent <jamesdkent21@gmail.com>
Date: Mon, 28 Apr 2025 12:32:43 -0500
Subject: [PATCH 3/3] change version of scipy, depending

---
 setup.cfg | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/setup.cfg b/setup.cfg
index 0df3a1d..1a24d12 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -27,7 +27,8 @@ install_requires =
     numpy>=1.8.0,<2.0; python_version == "3.9" and extra == 'stan'
     numpy>=1.8.0; python_version != "3.9" or extra != 'stan'
     pandas
-    scipy
+    scipy<1.13; python_version == "3.9" and extra == 'stan'
+    scipy; python_version != "3.9" or extra != 'stan'
     sympy
     wrapt
 packages = find: