ImportError: Bio.Alphabet has been removed from Biopython. In many cases, the alphabet can simply be ignored and removed from scripts. In a few cases, you may need to specify the ``molecule_type`` as an annotation on a SeqRecord for your script to work correctly. Please see https://biopython.org/wiki/Alphabet for more information.
AttributeError: module 'matplotlib.cm' has no attribute 'register_cmap'
Traceback (most recent call last):
File "/mnt/e/R/SPADE/./SPADE.py", line 1198, in <module>
import visualisation as vs
File "/mnt/e/R/SPADE/visualisation.py", line 5, in <module>
import matplotlib
File "/home/bio/.local/lib/python3.10/site-packages/matplotlib/__init__.py", line 107, in <module>
from collections import MutableMapping
ImportError: cannot import name 'MutableMapping' from 'collections' (/usr/lib/python3.10/collections/__init__.py)
