FIX: Run CI now when repo is RadCLss.

.github/workflows/run-test-suite.yml

@@ -8,10 +8,14 @@ on:
   schedule:
     - cron: '0 2 * * *'  # Runs at 2:00 AM UTC every day
 
+env:
+  ARM_USERNAME: ${{ secrets.ARM_USERNAME }}
+  ARM_PASSWORD: ${{ secrets.ARM_PASSWORD }}
+
 jobs:
    build:
      name: ${{ matrix.os }}-${{ matrix.python-version }}
-     if: github.repository == 'openradar/PyDDA'
+     if: github.repository == 'ARM-Development/radclss'
      runs-on: ${{ matrix.os }}-latest
      defaults:
         run:
@@ -33,24 +37,21 @@ jobs:
         uses: mamba-org/setup-micromamba@v2.0.6
         with:
            create-args: python=${{ matrix.python-version }}
-           environment-file: continuous_integration/environment-actions-${{ matrix.python-version }}.yml
+           environment-file: continuous-integration/environment-actions.yml
            micromamba-version: '2.0.0-0'
-           environment-name: pydda-env
+           environment-name: radclss_env
            cache-downloads: false
 
       - name: Install RadCLss
         shell: bash -l {0}
         run: |
           python -m pip install -e . --no-deps --force-reinstall
 
-      - name: Lint with flake8
+      - name: Lint with ruff
         shell: bash -l {0}
         run: |
-           pip install flake8
-           # stop the build if there are Python syntax errors or undefined names
-           flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
-           # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-           flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+          pip install ruff
+          ruff check .
 
       - name: Test with pytest
         shell: bash -l {0}

continuous-integration/environment-actions.yml

@@ -5,6 +5,7 @@ channels:
 dependencies:
    - arm_pyart
    - pip
+   - act-atmos
    - xradar
    - pytest
    - pytest-mpl

examples/bnf_example.py

@@ -1,42 +1,62 @@
 import radclss
 import glob
-import xradar as xd
-import xarray as xr
 import matplotlib.pyplot as plt
 
 from dask.distributed import Client, LocalCluster
 
+
 def main():
-    date = '20250619'
-    radar_files = glob.glob(f'/Volumes/Untitled/bnf/bnfcsapr2cmacS3.c1/*{date}*.nc')
-    volumes = {'date': date,
-            'radar': radar_files[0:2],  # Limit to first 2 files for testing
-            'sonde': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfsondewnpnM1.b1/*{date}*.cdf'),
-            'vd_M1': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfvdisquantsM1.c1/*{date}*.nc'),
-            'met_M1': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfmetM1.b1/*{date}*'),
-            'met_S20': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfmetS20.b1/*{date}*'),
-            'met_S30': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfmetS30.b1/*{date}*'),
-            'met_S40': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfmetS40.b1/*{date}*'),
-            'wxt_S13': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfmetwxtS13.b1/*{date}*.nc'),
-            'pluvio_M1': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfwbpluvio2M1.a1/*{date}*.nc'),
-            'ld_M1': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfldquantsM1.c1/*{date}*.nc'),
-            'ld_S30': glob.glob(f'/Volumes/Untitled/bnf/in_situ/bnfldquantsS30.c1/*{date}*.nc')}
+    date = "20250619"
+    radar_files = glob.glob(f"/Volumes/Untitled/bnf/bnfcsapr2cmacS3.c1/*{date}*.nc")
+    volumes = {
+        "date": date,
+        "radar": radar_files[0:2],  # Limit to first 2 files for testing
+        "sonde": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfsondewnpnM1.b1/*{date}*.cdf"
+        ),
+        "vd_M1": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfvdisquantsM1.c1/*{date}*.nc"
+        ),
+        "met_M1": glob.glob(f"/Volumes/Untitled/bnf/in_situ/bnfmetM1.b1/*{date}*"),
+        "met_S20": glob.glob(f"/Volumes/Untitled/bnf/in_situ/bnfmetS20.b1/*{date}*"),
+        "met_S30": glob.glob(f"/Volumes/Untitled/bnf/in_situ/bnfmetS30.b1/*{date}*"),
+        "met_S40": glob.glob(f"/Volumes/Untitled/bnf/in_situ/bnfmetS40.b1/*{date}*"),
+        "wxt_S13": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfmetwxtS13.b1/*{date}*.nc"
+        ),
+        "pluvio_M1": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfwbpluvio2M1.a1/*{date}*.nc"
+        ),
+        "ld_M1": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfldquantsM1.c1/*{date}*.nc"
+        ),
+        "ld_S30": glob.glob(
+            f"/Volumes/Untitled/bnf/in_situ/bnfldquantsS30.c1/*{date}*.nc"
+        ),
+    }
 
-    input_site_dict = {'M1': (34.34525, -87.33842, 293),
-                    'S4': (34.46451, -87.23598, 197),
-                    'S20': (34.65401, -87.29264, 178),
-                    'S30': (34.38501, -86.92757, 183),
-                    'S40': (34.17932, -87.45349, 236),
-                    'S13': (34.343889, -87.350556, 286)}
-    with Client(LocalCluster(n_workers=2, threads_per_worker=1)) as client:
-        my_columns = radclss.core.radclss(volumes, input_site_dict, serial=False, verbose=True)
-    radclss.io.write_radclss_output(my_columns, 'radclss_example.nc', 'csapr2radclss.c2')
+    input_site_dict = {
+        "M1": (34.34525, -87.33842, 293),
+        "S4": (34.46451, -87.23598, 197),
+        "S20": (34.65401, -87.29264, 178),
+        "S30": (34.38501, -86.92757, 183),
+        "S40": (34.17932, -87.45349, 236),
+        "S13": (34.343889, -87.350556, 286),
+    }
+    with Client(LocalCluster(n_workers=2, threads_per_worker=1)) as client:  # noqa
+        my_columns = radclss.core.radclss(
+            volumes, input_site_dict, serial=False, verbose=True
+        )
+    radclss.io.write_radclss_output(
+        my_columns, "radclss_example.nc", "csapr2radclss.c2"
+    )
 
     for vars in my_columns.data_vars:
         print(vars, my_columns[vars].dtype)
-    fig, ax = radclss.vis.create_radclss_columns('radclss_example.nc')
+    fig, ax = radclss.vis.create_radclss_columns("radclss_example.nc")
     print(fig)
     plt.show()
 
+
 if __name__ == "__main__":
     main()

radclss/__init__.py

@@ -4,8 +4,8 @@
 ====================================================
 """
 
-from . import config
-from . import core
-from . import util
-from . import vis
-from . import io
+from . import config  # noqa
+from . import core  # noqa
+from . import util  # noqa
+from . import vis  # noqa
+from . import io  # noqa

radclss/config/__init__.py

@@ -1,4 +1,18 @@
-from .default_config import DEFAULT_DISCARD_VAR, set_discarded_variables
-from .output_config import set_output_site, set_output_facility, set_output_platform, set_output_level
-from .output_config import set_output_gate_time_attrs, set_output_time_offset_attrs, get_output_config
-from .output_config import set_output_alt_attrs, set_output_lat_attrs, set_output_lon_attrs, set_output_station_attrs
+from .default_config import DEFAULT_DISCARD_VAR, set_discarded_variables  # noqa
+from .output_config import (
+    set_output_site,  # noqa
+    set_output_facility,  # noqa
+    set_output_platform,  # noqa
+    set_output_level,  # noqa
+)  # noqa
+from .output_config import (
+    set_output_gate_time_attrs,  # noqa
+    set_output_time_offset_attrs,  # noqa
+    get_output_config,  # noqa
+)  # noqa
+from .output_config import (
+    set_output_alt_attrs,  # noqa
+    set_output_lat_attrs,  # noqa
+    set_output_lon_attrs,  # noqa
+    set_output_station_attrs,  # noqa
+)  # noqa

radclss/config/output_config.py

@@ -2,18 +2,35 @@
 OUTPUT_FACILITY = "S2"
 OUTPUT_PLATFORM = "csapr2radclss"
 OUTPUT_LEVEL = "c2"
-OUTPUT_GATE_TIME_ATTRS = {'long_name': ('Time in Seconds that Cooresponds to the Start'
-                                        + " of each Individual Radar Volume Scan before"
-                                        + " Concatenation"),
-                            'description': 'Time in Seconds that Cooresponds to the Minimum Height Gate'}
-OUTPUT_TIME_OFFSET_ATTRS = dict(long_name=("Time in Seconds Since Midnight"),
-                                            description=("Time in Seconds Since Midnight that Cooresponds"
-                                                        + "to the Center of Each Height Gate"
-                                                        + "Above the Target Location "))
-OUTPUT_STATION_ATTRS = dict(long_name="Bankhead National Forest AMF-3 In-Situ Ground Observation Station Identifers")
-OUTPUT_LAT_ATTRS = dict(long_name=f'Latitude of BNF AMF-3 Ground Observation Site', units='Degrees North')
-OUTPUT_LON_ATTRS = dict(long_name='Longitude of BNF AMF-3 Ground Observation Site', units='Degrees East')
-OUTPUT_ALT_ATTRS = dict(long_name="Altitude above mean sea level for each station", units="m")
+OUTPUT_GATE_TIME_ATTRS = {
+    "long_name": (
+        "Time in Seconds that Cooresponds to the Start"
+        + " of each Individual Radar Volume Scan before"
+        + " Concatenation"
+    ),
+    "description": "Time in Seconds that Cooresponds to the Minimum Height Gate",
+}
+OUTPUT_TIME_OFFSET_ATTRS = dict(
+    long_name=("Time in Seconds Since Midnight"),
+    description=(
+        "Time in Seconds Since Midnight that Cooresponds"
+        + "to the Center of Each Height Gate"
+        + "Above the Target Location "
+    ),
+)
+OUTPUT_STATION_ATTRS = dict(
+    long_name="Bankhead National Forest AMF-3 In-Situ Ground Observation Station Identifers"
+)
+OUTPUT_LAT_ATTRS = dict(
+    long_name="Latitude of BNF AMF-3 Ground Observation Site", units="Degrees North"
+)
+OUTPUT_LON_ATTRS = dict(
+    long_name="Longitude of BNF AMF-3 Ground Observation Site", units="Degrees East"
+)
+OUTPUT_ALT_ATTRS = dict(
+    long_name="Altitude above mean sea level for each station", units="m"
+)
+
 
 def set_output_site(site):
     """
@@ -27,6 +44,7 @@ def set_output_site(site):
     global OUTPUT_SITE
     OUTPUT_SITE = site
 
+
 def set_output_facility(facility):
     """
     Set the output facility for RadCLss files.
@@ -39,6 +57,7 @@ def set_output_facility(facility):
     global OUTPUT_FACILITY
     OUTPUT_FACILITY = facility
 
+
 def set_output_platform(platform):
     """
     Set the output platform for RadCLss files.
@@ -51,6 +70,7 @@ def set_output_platform(platform):
     global OUTPUT_PLATFORM
     OUTPUT_PLATFORM = platform
 
+
 def set_output_level(level):
     """
     Set the output level for RadCLss files.
@@ -63,21 +83,23 @@ def set_output_level(level):
     global OUTPUT_LEVEL
     OUTPUT_LEVEL = level
 
+
 def set_output_gate_time_attrs(attrs):
     """
-    Set the attributes for the gate_time variable.  
+    Set the attributes for the gate_time variable.
 
     Parameters
     ----------
     attrs : dict
         Dictionary of attributes for gate_time.
     """
     global OUTPUT_GATE_TIME_ATTRS
-    OUTPUT_GATE_TIME_ATTRS = attrs  
+    OUTPUT_GATE_TIME_ATTRS = attrs
+
 
 def set_output_time_offset_attrs(attrs):
     """
-    Set the attributes for the time_offset variable.    
+    Set the attributes for the time_offset variable.
 
     Parameters
     ----------
@@ -87,17 +109,19 @@ def set_output_time_offset_attrs(attrs):
     global OUTPUT_TIME_OFFSET_ATTRS
     OUTPUT_TIME_OFFSET_ATTRS = attrs
 
+
 def set_output_station_attrs(attrs):
     """
     Set the attributes for the station variable.
-    
+
     Parameters
     ----------
     attrs : dict
         Dictionary of attributes for station.
     """
     global OUTPUT_STATION_ATTRS
-    OUTPUT_STATION_ATTRS = attrs    
+    OUTPUT_STATION_ATTRS = attrs
+
 
 def set_output_lat_attrs(attrs):
     """
@@ -111,17 +135,19 @@ def set_output_lat_attrs(attrs):
     global OUTPUT_LAT_ATTRS
     OUTPUT_LAT_ATTRS = attrs
 
+
 def set_output_lon_attrs(attrs):
     """
     Set the attributes for the lon variable.
-    
+
     Parameters
     ----------
     attrs : dict
         Dictionary of attributes for lon.
     """
     global OUTPUT_LON_ATTRS
-    OUTPUT_LON_ATTRS = attrs    
+    OUTPUT_LON_ATTRS = attrs
+
 
 def set_output_alt_attrs(attrs):
     """
@@ -133,7 +159,8 @@ def set_output_alt_attrs(attrs):
         Dictionary of attributes for alt.
     """
     global OUTPUT_ALT_ATTRS
-    OUTPUT_ALT_ATTRS = attrs   
+    OUTPUT_ALT_ATTRS = attrs
+
 
 def get_output_config():
     """
@@ -154,6 +181,5 @@ def get_output_config():
         "station_attrs": OUTPUT_STATION_ATTRS,
         "lat_attrs": OUTPUT_LAT_ATTRS,
         "lon_attrs": OUTPUT_LON_ATTRS,
-        "alt_attrs": OUTPUT_ALT_ATTRS
-    } 
-
+        "alt_attrs": OUTPUT_ALT_ATTRS,
+    }

radclss/io/__init__.py

@@ -1 +1 @@
-from .write import write_radclss_output
+from .write import write_radclss_output  # noqa