Template structure for analyzing HSN data.
This is a template repository for a standard layout for analyzing a single-neuron project.
This template follows the general purpose ProjectTemplate layout from StructuredScience.
For information on how to use this template in a project, see the HSNPipeline Guide.
Note: if copying this template for use, this section can be removed.
Provide an overview of the project / analysis here, for example:
This repository analyses data from the XX task, which is ...
This repository requires Python >= 3.7.
As well as typical scientific Python packages, dependencies include:
The full list of dependencies is listed in requirements.txt.
Fill in or edit any additional requirements here.
This repository is set up in the following way:
code/contains custom code and utilitiesnotebooks/contains notebooks for exploring analysesscripts/contains stand alone scripts
Add or edit any details about repository layout here.
Add any notes about the dataset here
The datasets analyzed in this project are from human subjects with implanted microwires.
Data notes:
- Datasets for this project are organized into the NWB format.
- Basic preprocessing and data conversion is done in the ConvertXX repository [ADD LINK].
- Spike sorting, to isolate putative single-neurons, has been performed on this data.