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1 change: 1 addition & 0 deletions zama-poc/src/genome_processing/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -53,6 +53,7 @@ pub fn get_genotype_encoding_map() -> HashMap<&'static str, u8> {
("TT", 10),
("NN", 11),
("", 12), ("???", 12),
("--", 12),
])
}

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6 changes: 6 additions & 0 deletions zama-poc/src/zama_compute/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -107,10 +107,16 @@ pub fn run_iteration(filename: &str, num_lines: usize) -> result::Result<(), Err
return Ok(());
}


pub fn check_genotype(encrypted_genotypes: &HashMap<u64, CompressedFheUint8>, target_rsid: &str, target_genotype: &str) -> Result<FheBool, Error> {
let encoded_target_genotype = encode_genotype(target_genotype);
let encrypted_target_genotype = FheUint8::try_encrypt_trivial(encoded_target_genotype).unwrap();
let encoded_rsid = genome_processing::encode_rsid(target_rsid);
let encrypted_false = FheBool::try_encrypt_trivial(false).unwrap();
match encrypted_genotypes.get(&encoded_rsid) {
Some(_) => {}
None => return Ok(encrypted_false),
}
let encrypted_genotype = encrypted_genotypes.get(&encoded_rsid).unwrap();
let decompressed_encrypted_genotype = encrypted_genotype.decompress();
Ok(decompressed_encrypted_genotype.eq(encrypted_target_genotype))
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