Host mesh fitting example

Fitting/hostMeshFitting/Fortran/readMe

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+
+
+This is a 2D example of Host Mesh Fitting using Lagrangian Basis Functions. 
+

Fitting/hostMeshFitting/MakeFile

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+# -*- makefile -*-
+#
+# For use with GNU make.
+#
+#
+#----------------------------------------------------------------------------------------------------------------------------------
+# Makefile for compiling OpenCMISS examples
+#
+# Original by Chris Bradley adapted from the CMISS Makefile by Karl Tomlinson 
+# Changes:
+#
+#----------------------------------------------------------------------------------------------------------------------------------
+#
+# LICENSE
+#
+# Version: MPL 1.1/GPL 2.0/LGPL 2.1
+#
+# The contents of this file are subject to the Mozilla Public License
+# Version 1.1 (the "License"); you may not use this file except in
+# compliance with the License. You may obtain a copy of the License at
+# http://www.mozilla.org/MPL/
+#
+# Software distributed under the License is distributed on an "AS IS"
+# basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
+# License for the specific language governing rights and limitations
+# under the License.
+#
+# The Original Code is OpenCMISS
+#
+# The Initial Developer of the Original Code is University of Auckland,
+# Auckland, New Zealand and University of Oxford, Oxford, United
+# Kingdom. Portions created by the University of Auckland and University
+# of Oxford are Copyright (C) 2007 by the University of Auckland and
+# the University of Oxford. All Rights Reserved.
+#
+# Contributor(s):
+#
+# Alternatively, the contents of this file may be used under the terms of
+# either the GNU General Public License Version 2 or later (the "GPL"), or
+# the GNU Lesser General Public License Version 2.1 or later (the "LGPL"),
+# in which case the provisions of the GPL or the LGPL are applicable instead
+# of those above. If you wish to allow use of your version of this file only
+# under the terms of either the GPL or the LGPL, and not to allow others to
+# use your version of this file under the terms of the MPL, indicate your
+# decision by deleting the provisions above and replace them with the notice
+# and other provisions required by the GPL or the LGPL. If you do not delete
+# the provisions above, a recipient may use your version of this file under
+# the terms of any one of the MPL, the GPL or the LGPL.
+#	
+#----------------------------------------------------------------------------------------------------------------------------------
+
+MAKEFLAGS = --no-builtin-rules --warn-undefined-variables
+
+#----------------------------------------------------------------------------------------------------------------------------------
+
+ifndef OPENCMISS_ROOT
+  OPENCMISS_ROOT := ../../..
+  GLOBAL_ROOT := $(CURDIR)/../../..
+else
+  GLOBAL_ROOT := ${OPENCMISS_ROOT}/cm
+endif
+
+#----------------------------------------------------------------------------------------------------------------------------------
+
+EXAMPLE_PATH=Fitting/
+
+EXAMPLE_NAME = HostMeshFitting
+
+include $(GLOBAL_ROOT)/ExampleMakefile
+

Fitting/hostMeshFitting/Makefile

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+# -*- makefile -*-
+#
+# For use with GNU make.
+#
+#
+#----------------------------------------------------------------------------------------------------------------------------------
+# Makefile for compiling OpenCMISS examples
+#
+# Original by Chris Bradley adapted from the CMISS Makefile by Karl Tomlinson 
+# Changes:
+#
+#----------------------------------------------------------------------------------------------------------------------------------
+#
+# LICENSE
+#
+# Version: MPL 1.1/GPL 2.0/LGPL 2.1
+#
+# The contents of this file are subject to the Mozilla Public License
+# Version 1.1 (the "License"); you may not use this file except in
+# compliance with the License. You may obtain a copy of the License at
+# http://www.mozilla.org/MPL/
+#
+# Software distributed under the License is distributed on an "AS IS"
+# basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
+# License for the specific language governing rights and limitations
+# under the License.
+#
+# The Original Code is OpenCMISS
+#
+# The Initial Developer of the Original Code is University of Auckland,
+# Auckland, New Zealand and University of Oxford, Oxford, United
+# Kingdom. Portions created by the University of Auckland and University
+# of Oxford are Copyright (C) 2007 by the University of Auckland and
+# the University of Oxford. All Rights Reserved.
+#
+# Contributor(s):
+#
+# Alternatively, the contents of this file may be used under the terms of
+# either the GNU General Public License Version 2 or later (the "GPL"), or
+# the GNU Lesser General Public License Version 2.1 or later (the "LGPL"),
+# in which case the provisions of the GPL or the LGPL are applicable instead
+# of those above. If you wish to allow use of your version of this file only
+# under the terms of either the GPL or the LGPL, and not to allow others to
+# use your version of this file under the terms of the MPL, indicate your
+# decision by deleting the provisions above and replace them with the notice
+# and other provisions required by the GPL or the LGPL. If you do not delete
+# the provisions above, a recipient may use your version of this file under
+# the terms of any one of the MPL, the GPL or the LGPL.
+#	
+#----------------------------------------------------------------------------------------------------------------------------------
+
+MAKEFLAGS = --no-builtin-rules --warn-undefined-variables
+
+#----------------------------------------------------------------------------------------------------------------------------------
+
+ifndef OPENCMISS_ROOT
+  OPENCMISS_ROOT := ../../..
+  GLOBAL_ROOT := $(CURDIR)/../../..
+else
+  GLOBAL_ROOT := ${OPENCMISS_ROOT}/cm
+endif
+
+#----------------------------------------------------------------------------------------------------------------------------------
+
+EXAMPLE_PATH=Fitting/
+
+EXAMPLE_NAME = HostMeshFitting
+
+include $(GLOBAL_ROOT)/ExampleMakefile
+

Fitting/hostMeshFitting/datafile1.txt

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+0.3  0.6
+0.7  0.5
+0.7  0.2
+0.1  0.3

Fitting/hostMeshFitting/datafile2.txt

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+0.1   0.9
+0.75  0.6
+0.8   0.25
+-0.1  0.5

Fitting/hostMeshFitting/make.out

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+

Fitting/hostMeshFitting/numericalCalculationHandWritten/read me

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+Hand-written notes of the host mesh fitting example ... 
+