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@RajLabMSSM

RajLabMSSM

The Raj Lab investigates neurodegenerative disorders through the application of computational methods to multi-omics data

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  1. echolocatoR echolocatoR Public

    Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

    R 42 14

  2. ggLocusZoom ggLocusZoom Public archive

    Create LocusZoom-style plots in R.

    R 22 4

  3. catalogueR catalogueR Public

    Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

    R 14 2

  4. Fine_Mapping Fine_Mapping Public

    Fine mapping of genes associated with Parkinson's Disease using a variety of methods

    HTML 11 4

  5. isoseq-pipeline isoseq-pipeline Public

    pipeline for working with PacBio long read RNA data using the outputs of isoseq3

    Python 9 4

  6. MiGA_public_release MiGA_public_release Public

    HTML 9

Repositories

Showing 10 of 62 repositories
  • RajLabMSSM/SAIGEQTL-pipeline’s past year of commit activity
    R 1 MIT 0 0 0 Updated Jan 14, 2026
  • SingleBrain Public
    RajLabMSSM/SingleBrain’s past year of commit activity
    R 6 0 0 0 Updated Jan 14, 2026
  • downstream-QTL Public

    set of scripts and pipelines to work with QTL results

    RajLabMSSM/downstream-QTL’s past year of commit activity
    HTML 8 2 7 2 Updated Dec 22, 2025
  • AD_MPRA Public

    AD Fine-mapping and MPRA

    RajLabMSSM/AD_MPRA’s past year of commit activity
    HTML 0 1 0 1 Updated Dec 16, 2025
  • ldsc Public

    LD Score Regression Pipeline

    RajLabMSSM/ldsc’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Nov 22, 2025
  • RajLabMSSM/mmQTL-pipeline’s past year of commit activity
    Python 5 MIT 0 0 0 Updated Oct 29, 2025
  • RNA-pipelines Public

    A repo to contain various RNA-seq processing pipelines, to cut down how many different repos I have.

    RajLabMSSM/RNA-pipelines’s past year of commit activity
    Python 3 3 4 0 Updated Oct 6, 2025
  • RajLabMSSM/GBA-LRRK2-monocytes’s past year of commit activity
    0 0 0 0 Updated Oct 2, 2025
  • editing-pipeline Public

    A set of snakemake pipelines for doing RNA editing

    RajLabMSSM/editing-pipeline’s past year of commit activity
    R 4 3 0 0 Updated Sep 25, 2025
  • echotabix Public

    echoverse module: Tabix indexing and querying.

    RajLabMSSM/echotabix’s past year of commit activity
    R 0 0 3 0 Updated Aug 23, 2025