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Automated testing of PyPI releases

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In RuleWorld/PyBioNetGen;

· jrfaeder opened on Apr 24, 2025

pkg_resources update breaks bngl

Status: Open.

#59 In RuleWorld/PyBioNetGen;

· luciansmith opened on Jul 15, 2024

distutils was deprecated in Python 3.12

Status: Open.

#58 In RuleWorld/PyBioNetGen;

· aadibiasi opened on May 22, 2024

NFsim version in bionetgen --version and info commands

enhancementNew feature or requestNew feature or request

Status: Open.

#57 In RuleWorld/PyBioNetGen;

· jrfaeder opened on Feb 28, 2024

Model writing omits keywords in reaction rules

bugSomething isn't workingSomething isn't working

Status: Open.

#55 In RuleWorld/PyBioNetGen;

· jrfaeder opened on Feb 8, 2024

Add links in documentation to online validation, introspection, and execution of BNGL models through runBioSimulations

Status: Open.

#33 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Oct 8, 2021

Suggestion: use py-perl5 for more seamless bridge to <code>BNGL2.pl</code>

enhancementNew feature or requestNew feature or request

Status: Open.

#22 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Sep 16, 2021

Raise exceptions on ill-formatted actions

bugSomething isn't workingSomething isn't working

Status: Open.

#21 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Sep 10, 2021

Suggestion: remove requirement for specific file extensions

enhancementNew feature or requestNew feature or request

Status: Open.

#6 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Jun 9, 2021

Suggestion: different PyPI name or equate version number to the version of BNG2

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Jun 8, 2021

In some cases it would be helpful to parse comments from BNGL files

enhancementNew feature or requestNew feature or request

Status: Open.

#2 In RuleWorld/PyBioNetGen;

· jonrkarr opened on Jun 8, 2021