Skip to content

Update README.md #2

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
adamjbarnas wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Update README.md #2

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 4 additions & 4 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,10 +12,10 @@
7. Verify that all tests were passed.

## Running the scripts
1 Place all the raw DSP output files in the same directory
2. In VS Coe, in a terminal, paste the following command. Be sure to change the input directory to the folder where your raw files are. You can select any output directory you like.
`conda run -n dsp-analysis python .dspy\run_dspy.py -i "[full path to directory containing raw files]" -o "[full path to output directory of your choice]"`
1 Place all the raw DSP output files in the same directory.
2. In VS Code, in a terminal, paste the following command. Be sure to change the input directory to the folder where your raw files are. You can select any output directory you like.
`conda run -n dsp-analysis python .\dspy\run_dspy.py -i "[full path to directory containing raw files]" -o "[full path to output directory of your choice]"`
3. Next, open Matlab and run `trajectory_wrapper.m`. Be sure to change the scriptDir and the trajDir as instructed in that file.
4. Save a copy of the meta data matching the columns of `.\tests\test_data\meta_data.csv`
5. Finally, back in the terminal, paste the following command
`conda run -n dsp-analysis python .\dspy\merge_dspy.py -i "[full path to the directory containing the OUTPUT of the previous steps"] -m "[full path to your metadata file]" - o "[full path to desired output file]`
`conda run -n dsp-analysis python .\dspy\run_merge_dspy.py -i "[full path to the directory containing the OUTPUT of the previous steps]" -m "[full path to your metadata file]" -o "[full path to desired output file]"`