Release 2025.2.0 #56
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Release 2025.2.0 #56
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If a target has only protein-level variants, but the provided target sequence is a nucleotide sequence, translate the nucleotide sequence to an amino acid sequence immediately after metadata ingestion. This change avoids alignment errors that can occur when a target sequence has been codon-optimized to a non-human organism. Since we do not have sufficient metadata to assume that a target sequence has been codon-optimized, always perform translation when there are no nucleotide-level variants for a target.
This should help slightly with timeout issues we see in production
This update changes how alignment is performed for some score sets, so bump major version.
Handle blank BLAT results, and fix BLAT results for some targets
…g annotated mappings Prior to this change, it was possible for some score rows to generate valid mappings with other score rows not creating a mapped variant. This had some negative downstream consequences, which will be remedied by ensuring that if any variant receives a mapped variant, all variants receive a mapped variant.
This update changes how alignment is performed for some score sets, so bump major version.
…ing as its sequence
…no nucleotide variants
…andling in mapping functions
…tput-for-all-variants
…-mapping-output-for-all-variants Guarantee mapping output for all variants
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Features / Enhancements
Fix Key Errors for blank BLAT results: #51
#45: #52