The folder contains:
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The data for analyses done in this project: "Data_03_08_24.csv" It's just a csv file, fine tuned for Czech language environment. Therefore, if openning the file outside R, you may experience problems with "," vs. "." dividing columns. Opening in R should always work. The file contains the following columns: "Culture_Year" - this is to identify which sample it is. We have nine samples from seven countries. "Sex" - during the data collection, participants (those in the photos) were asked on their "sex", the variable should most closely resemble "sex assigned at birth" "L_skin" - CIELab L*, skin lightness. "L_iris" - CIELab L*, iris lightness. "a_iris" - CIELab a*, iris "redness". "b_iris" - CIELab b*, iris "yellowness". "L_sclera" - CIELab L*, scleral lightness. "a_sclera" - CIELab a*, scleral "redness". "b_sclera" - CIELab b*, scleral "yellowness". "Age" - age... "Attr" - perceived attractiveness, rated by local raters. "SexT" - perceived sextypicality, rated by local raters as "femininity" in women and "masculinity" in men. "Nat" - Nationality, corresponds to a country in which the data was collected. "Group" - Sample and Sex combined. "LOCAL_DIST" - Facial shape distinctiveness, a variable obtained using landmark-based geometric morphometrics. "SexTypMeas" - Facial shape sextypicality, a variable obtained using landmark-based geometric morphometrics. "Asym" - Facial shape asymmetry, a variable obtained using landmark-based geometric morphometrics.
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"Eye Colour Project 1.Rproj" - R project, please download this file and run every script from this file, otherwise, we cannot ensure optimal display of the scripts below.
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"1_Calculating_Morphometrics.R" - Records on how the morphometric variables were computed. As we are not allowed to share the facial configurations, this script is for illustrative purposes only.
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"2_Drawing_distribution_plots_and_deriving_tables.R" a script (active with the file "Data_03_08_24.csv"), basic descriptive statistics.
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"3_Modeling_Decentred_MF_Together_Standardised_Together_aka_Main_Analysis_GEOADDED.R" main analyses' record. Works well with the data. Please note that the exact results may differ slightly as the MCMC sampling is a pseudo-stochastics process. Note: this file includes path analyses reported in the article, too. After revision, it also includes analyses done on samples pooled with regard to geographic location (therefore "GEOADDED").
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"4_Visualisation_Main_Analyses.R" - Script to render Figure 2 and Figure 3 of the main article (returns figures prior to a small polishig procedure conducted in InkScape).
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"5_Modeling_decentred_Alternatives_Standardised_together.R" first script containing alternative analyses. This file shows the layout of the models that (a) excluded Iranian sample, (b) excluded skin L* from the analysis.
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"6_Visualisation__Alternatives_Standardised together.R" script to draw figures based on the models from the previous script.
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"7_Modeling_decentred_Alternatives_Standardised_separately.R" second script to contain alternative analyses. This time, the data were standardised (transfered to variables with zero mean and SD = 1) separately.
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"8_Visualisation__Alternatives_Standardised_separately.R" script to draw figures based on the models from the previous script.
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"10_visualisation_pooled_samples.R" script to draw figures based on the models with geographically pooled samples.