#Inflam

Inflam is a data management system written in Python that manages trial data used in clinical inflammation studies.

Main features

Here are some key features of Inflam:

• Provide basic statistical analyses over clinical trial data
• Ability to work on trial data in Comma-Separated Value (CSV) format
• Generate plots of trial data
• Analytical functions and views can be easily extended based on its Model-View-Controller architecture

Prerequisites

Inflam requires the following Python packages:

• NumPy - makes use of NumPy's statistical functions
• Matplotlib - uses Matplotlib to generate statistical plots

The following optional packages are required to run Inflam's unit tests:

• pytest - Inflam's unit tests are written using pytest
• pytest-cov - Adds test coverage stats to unit testing

Installation

• Clone the repo git clone repo
• Create a virtual environment via python -m venv venv
• Install via pip install -e .
• Check everything runs by running pytest in the root directory

Basic usage

python3 inflammation-analysis.py data/inflammation-01.csv

Licence

MIT License

Copyright (c) 2022 stephen-dixon