Promoter_Poet_private

local copy at /n/groups/marks/users/erik/Promoter_Poet_private

Environment

use conda activate promoet

full env path /home/jix836/.conda/envs/promoet

Training

without human token: python scripts/train.py

with human token: python scripts/train_token.py

slurm script that works with both: train_o2.sh

relevant args: --max_len (total length of each set, default = 16k), --batch_size (change for CUDA OOM errors, default = 2)

Generation

without token: scripts/generate.py

with token: scripts/generate_token.py

slurm script that works with both: score.sh

relevant args: --output_csv_path, --batch_size (# seqs generated per prompt), --ckpt_path, --temp

Evaluation

everything in scripts\notebook.ipynb