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@rhinoella rhinoella changed the title Optimise Process to Fit Simulation Data Optimise GudPy to Fit Dissolve Data Mar 26, 2024
rhinoella and others added 16 commits March 26, 2024 13:37
* Doc: create releasenotes

* Create ReleaseNotes.md

* Check purge output before running Gudrun

* Clear the worker thread on error

* Delete ReleaseNotes.md

* Delete gudpy/core/ReleaseNotes.md
* Add libxcb-cursor0 to installation deps for singularity.

* Fix entry point command.
* Fix obtaining gudrun binaries

* fix unzip command

* Fix unzipping

* Fix url

* Update gudrun tag

* Fix path

* Fix path

* Update permissions

* Remove print

* Fix path

* Remove modex

* Fix paths

* Remove modex

* Install dependencies
* Fix output tree

* Fix output tree
* Remove print statements

* Fix gudpy tree logic

* Fix gudpy tree logic

* Fix sampleplotconfig to not execute if there is no gudrun output

* Fix check box signal
* Update from v3 to v4 for uploading artifacts

* Update for v4 changes
* fix: Test result uploading

* Remember to put $

* Use pattern and not name
* Store output in data

* Create separate parser classes

* Create dedicated iO handling

* Update functions

* Continue refactoring

* Apply breaking changes

* Fix checks

* Fix YAML imports

* Fix instrument parsing

* Fix export, update test project

* Lint, delete gudpy_yaml.py

* Small bug fixes

* Lint: remove unused import

* Test path fis

* Text updating

* Syntax fix

* Remove unused import, allow tests without lint

* update test

* Revert error message

* Add output folder attr to tests

* Update tests

* Add writeGudrunFileTo method

* Switch to correct parser

* Add decorator

* Bugfixes

* Correctly identify sample files

* Fix output data paths

* Fix iteration output handling

* Fix order of datafile initialisation

* Change exception assertions

* Fix assertions

* Assertions

* Remove elements from dict

* Fix config setting

* Remove data files from assertion

* Remove print statement

* Pop the dict

* Apply rebase

* Create separate parser classes

* Create dedicated iO handling

* Update functions

* Continue refactoring

* Apply breaking changes

* Fix checks

* Fix YAML imports

* Fix instrument parsing

* Fix export, update test project

* Lint, delete gudpy_yaml.py

* Small bug fixes

* Lint: remove unused import

* Test path fis

* Text updating

* Syntax fix

* Remove unused import, allow tests without lint

* update test

* Revert error message

* Add output folder attr to tests

* Update tests

* Add writeGudrunFileTo method

* Switch to correct parser

* Add decorator

* Bugfixes

* Correctly identify sample files

* Fix output data paths

* Fix iteration output handling

* Fix order of datafile initialisation

* Change exception assertions

* Fix assertions

* Assertions

* Remove elements from dict

* Fix config setting

* Remove data files from assertion

* Remove print statement

* Pop the dict

* Fix purge file path

* Change directory sourcing

* Fix path separator for windows

* Fix windows
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3 participants