Bump the python-requirements group across 1 directory with 14 updates #21

dependabot · 2025-08-12T20:21:05Z

Bumps the python-requirements group with 14 updates in the /envs directory:

Package	From	To
simpleitk	`2.5.0`	`2.5.2`
coverage	`7.8.2`	`7.10.3`
jupyterlab	`4.4.3`	`4.4.5`
monai	`1.4.0`	`1.5.0`
pandas	`2.2.3`	`2.3.1`
plotly	`6.1.2`	`6.2.0`
pre-commit	`4.2.0`	`4.3.0`
pytest-cov	`6.1.1`	`6.2.1`
pytest	`8.3.5`	`8.4.1`
rich	`14.0.0`	`14.1.0`
ruff	`0.11.12`	`0.12.8`
safetensors	`0.5.3`	`0.6.2`
timm	`1.0.15`	`1.0.19`
wandb	`0.19.11`	`0.21.1`

Updates simpleitk from 2.5.0 to 2.5.2

Commits

2018b6b Update version to 2.5.2
f4f47df Merge pull request #2319 from blowekamp/release_ITK_5_4_4
392ab24 Update ITK Superbuild version to 5.4.4
a4c5c44 Merge pull request #2306 from blowekamp/fix_docker_as
756b401 Fix Docker FromAsCasing error for Doxygen
2f12793 Merge pull request #2294 from blowekamp/image_series_reader_options
ad34fae Add ForceOrthogonalDirection and ReverseOrder options
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Updates coverage from 7.8.2 to 7.10.3

Changelog

Sourced from coverage's changelog.

Version 7.10.3 — 2025-08-10

Fixes for patch = subprocess:

If subprocesses spawned yet more subprocesses simultaneously, some coverage could be missed. This is now fixed, closing issue 2024_.

If subprocesses were created in other directories, their data files were stranded there and not combined into the totals, as described in issue 2025_. This is now fixed.

On Windows (or maybe only some Windows?) the patch would fail with a ModuleNotFound error trying to import coverage. This is now fixed, closing issue 2022_.

Originally only options set in the coverage configuration file would apply to subprocesses. Options set on the coverage run command line (such as --branch) wouldn't be communicated to the subprocesses. This could lead to combining failures, as described in issue 2021_. Now the entire configuration is used in subprocesses, regardless of its origin.

Added debug=patch to help diagnose problems.

Fix: really close all SQLite databases, even in-memory ones. Closes issue 2017_.

.. _issue 2017: nedbat/coveragepy#2017 .. _issue 2021: nedbat/coveragepy#2021 .. _issue 2022: nedbat/coveragepy#2022 .. _issue 2024: nedbat/coveragepy#2024 .. _issue 2025: nedbat/coveragepy#2025

.. _changes_7-10-2:

Version 7.10.2 — 2025-08-03

Fix: some code with NOP bytecodes could report missing branches that are actually executed. This is now fixed, closing issue 1999_. Python 3.9 still shows the problem.

.. _issue 1999: nedbat/coveragepy#1999

.. _changes_7-10-1:

Version 7.10.1 — 2025-07-27

... (truncated)

Commits

0691ce5 docs: sample HTML for 7.10.3
34c9aca docs: prep for 7.10.3
fd83f21 style: lists for homogenous collections
d961800 docs: remove an unused reference
697d4bb fix: subprocesses inherit the entire configuration. #2021
b6db3b7 build: show the total during local metacov
cfbceb5 docs: reverted #2018
264bbd3 refactor: more patch logging
3ecdfaf chore: bump the action-dependencies group with 2 updates (#2026)
41a2256 fix: revert "thread safe resume (#2018)" (#2027)
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Updates jupyterlab from 4.4.3 to 4.4.5

Commits

71239d1 [ci skip] Publish 4.4.5
5c433d7 Backport PR #17705: Fix scrollbar behaviour when scrolling past long cell in ...
ed7abfe Backport PR #17698: Update @codemirror/view to v6.38.1, fixing lineWrap...
4f7e3c1 Backport PR #17693: Fix auto completion on irrelevant cell types (#17711)
f19dde2 Backport PR #17701: Do not change silently when executing an empty cell (#17710)
c1e374d Backport PR #17707: Reduce UI blocking time when saving large notebooks by us...
76f1259 Backport PR #17703: Normalize ToolbarButtonComponent dataset attributes wit...
0d0e214 Backport PR #17699: Bump brace-expansion from 1.1.11 to 1.1.12 (#17704)
f801d20 Backport PR #17591: Fixes for accessibility issues reported on missing ARIA r...
8e240df Backport PR #17623: Documentation for Kernel Subshells (#17687)
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Updates monai from 1.4.0 to 1.5.0

Release notes

Sourced from monai's releases.

1.5.0

Added

Add platform-specific constraints to setup.cfg (#8260)

Add PythonicWorkflow (#8151)

Add SM architecture version check (#8199)

Add MedNext implementation (#8004)

Added a top button to CONSTRIBUTING.md (#8163)

Adding CODEOWNERS (#8457)

Restormer Implementation (#8312)

Add rectified flow noise scheduler for accelerated diffusion model (#8374)

Add prediction type for rflow scheduler (#8386)

Add Average Precision to metrics (#8089)

Implementation of a Masked Autoencoder for representation learning (#8152)

Implement TorchIO transforms wrapper analogous to TorchVision transfo… (#7579)

8328 nnunet bundle integration (#8329)

Adding Support Policy + Doc Updates (#8458)

Classifier free guidance (#8460)

Fixed

Fix Ruff Numpy2 deprecation rules (#8179)

Fix torch.load() frequently warning in PersistentDataset and GDSDataset (#8177)

Fix the logging of a nested dictionary metric in MLflow (#8169)

Fix ImageFilter to allow Gaussian filter without filter_size (#8189)

Fix fold_constants, test_handler switched to onnx (#8211)

Fix TypeError in meshgrid (#8252)

Fix PatchMerging duplicate merging (#8285)

Fix test load image issue (#8297)

Fix bundle download error from ngc source (#8307)

Fix deprecated usage in zarr (#8313, #8477)

Fix DataFrame subsets indexing in CSVDataset() (#8351)

Fix packaging imports in version comparison logic (#8347)

Fix CommonKeys docstring (#8342)

Fix: correctly apply fftshift to real-valued data inputs (#8407)

Fix OptionalImportError: required package openslide is not installed (#8419)

Fix cosine noise scheduler (#8427)

Fix AutoencoderKL docstrings. (#8445)

Inverse Threading Fix (#8418)

Fix normalize intensity (#8286)

Fix path at test onnx trt export (#8361)

Fix broken urls (#8481, #8483)

Changed

[DOC] Update README.md (#8157)

Streamlined Rearrange in SpatialAttentionBlock (#8130)

Optimize VISTA3D (#8123)

Skip torch trt convert test with torch newer than or equal to 2.5.0 (#8165)

Enable redirection of all loggers by configuring a FileHandler within the bundle (#8142)

Apply pyupgrade fixes for Python 3.9+ syntax (#8150)

Update base image to 2410 (#8164)

TRT support for MAISI (#8153)

... (truncated)

Changelog

Sourced from monai's changelog.

[1.5.0] - 2025-06-13

What's Changed

Added

Add platform-specific constraints to setup.cfg (#8260)

Add PythonicWorkflow (#8151)

Add SM architecture version check (#8199)

Add MedNext implementation (#8004)

Added a top button to CONSTRIBUTING.md (#8163)

Adding CODEOWNERS (#8457)

Restormer Implementation (#8312)

Add rectified flow noise scheduler for accelerated diffusion model (#8374)

Add prediction type for rflow scheduler (#8386)

Add Average Precision to metrics (#8089)

Implementation of a Masked Autoencoder for representation learning (#8152)

Implement TorchIO transforms wrapper analogous to TorchVision transfo… (#7579)

8328 nnunet bundle integration (#8329)

Adding Support Policy + Doc Updates (#8458)

Classifier free guidance (#8460)

Fixed

Fix Ruff Numpy2 deprecation rules (#8179)

Fix torch.load() frequently warning in PersistentDataset and GDSDataset (#8177)

Fix the logging of a nested dictionary metric in MLflow (#8169)

Fix ImageFilter to allow Gaussian filter without filter_size (#8189)

Fix fold_constants, test_handler switched to onnx (#8211)

Fix TypeError in meshgrid (#8252)

Fix PatchMerging duplicate merging (#8285)

Fix test load image issue (#8297)

Fix bundle download error from ngc source (#8307)

Fix deprecated usage in zarr (#8313, #8477)

Fix DataFrame subsets indexing in CSVDataset() (#8351)

Fix packaging imports in version comparison logic (#8347)

Fix CommonKeys docstring (#8342)

Fix: correctly apply fftshift to real-valued data inputs (#8407)

Fix OptionalImportError: required package openslide is not installed (#8419)

Fix cosine noise scheduler (#8427)

Fix AutoencoderKL docstrings. (#8445)

Inverse Threading Fix (#8418)

Fix normalize intensity (#8286)

Fix path at test onnx trt export (#8361)

Fix broken urls (#8481, #8483)

Changed

[DOC] Update README.md (#8157)

Streamlined Rearrange in SpatialAttentionBlock (#8130)

Optimize VISTA3D (#8123)

Skip torch trt convert test with torch newer than or equal to 2.5.0 (#8165)

Enable redirection of all loggers by configuring a FileHandler within the bundle (#8142)

Apply pyupgrade fixes for Python 3.9+ syntax (#8150)

... (truncated)

Commits

d388d1c Update citation (#8484)
3d6021a Fix: ZarrAvgMerger ValueError with zarr_format 3 (#8477)
d38c93f Removed or Replaced Broken URLs (#8483)
e5c512f Fix integration test in 24.10 (#8480)
423ea74 Fixing URLs in README.md (#8481)
dfe6fc7 Changelog For 1.5 (#8474)
c3a317d Adding CODEOWNERS (#8457)
c3a3397 Remove unused test cases in bundle load (#8463)
2d41655 Classifier free guidance (#8460)
f85135b Remove deprecated net_name in test file (#8461)
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Updates pandas from 2.2.3 to 2.3.1

Commits

c888af6 RLS: 2.3.1
6aea302 Backport PR #61794 on branch 2.3.x (DOC: prepare 2.3.1 whatsnew notes for rel...
a160ae6 [backport 2.3.x] BUG[string]: incorrect index downcast in DataFrame.join (#61...
cf5db68 [backport 2.3.x] TST: update expected dtype for sum of decimals with pyarrow ...
50ad136 Backport PR #61795 on branch 2.3.x (DOC: add section about upcoming pandas 3....
6c762f3 Backport PR #61770 on branch 2.3.x (BUG: Fix unpickling of string dtypes of l...
fd99ef7 Backport PR #61705 on branch 2.3.x (DOC: add pandas 3.0 migration guide for t...
4e5237d [backport 2.3.x] CI: clean up wheel build workarounds now that Cython 3.1.0 i...
4d42cd8 Revert "[2.3.x] DEPS: Drop Python 3.9 (#60792)" (#61755)
5d32ae9 BLD: Build wheels for 3.9 and musllinux-aarch64 for pandas 2.3 (#61569)
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Updates plotly from 6.1.2 to 6.2.0

Release notes

Sourced from plotly's releases.

v6.2.0

Added

Add SRI (Subresource Integrity) hash support for CDN script tags when using include_plotlyjs='cdn'. This enhances security by ensuring browser verification of CDN-served plotly.js files [#5165] (with thanks to @ddworken)

Fixed

Allow setting Plotly.js path via pio.defaults [#5207]

Changed

Refactor validation code to reduce bundle size [#5214] (with thanks to @bmaranville)

Add deprecation warnings when using Kaleido v0 or deprecated image export features [#5177]

Changelog

Sourced from plotly's changelog.

[6.2.0] - 2025-06-26

Added

Add SRI (Subresource Integrity) hash support for CDN script tags when using include_plotlyjs='cdn'. This enhances security by ensuring browser verification of CDN-served plotly.js files [#5165] (with thanks to @ddworken)

Fixed

Allow setting Plotly.js path via pio.defaults [#5207]

Changed

Refactor validation code to reduce bundle size [#5214] (with thanks to @bmaranville)

Add deprecation warnings when using Kaleido v0 or deprecated image export features [#5177]

Commits

12be407 update changelog
8c6acc2 Merge branch 'main' into release-6.2.0
abe7595 update changelog
3ab4eb4 Merge pull request #5242 from plotly/LiamConnors-patch-3
75ebf6a Update what_about_dash.md
e7586e3 bump version to 6.2.0
6096ba4 update changelog
f2a9d60 Merge pull request #5236 from plotly/re-enable-kaleido-deprecations
8b1e878 update changelog
2159db5 bump kaleido version specified in extras
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Updates pre-commit from 4.2.0 to 4.3.0

Changelog

Sourced from pre-commit's changelog.

4.3.0 - 2025-08-09

Features

language: docker / language: docker_image: detect rootless docker.

#3446 PR by @matthewhughes934.

#1243 issue by @dkolepp.

language: julia: avoid startup.jl when executing hooks.

#3496 PR by @ericphanson.

language: dart: support latest dart versions which require a higher sdk lower bound.

#3507 PR by @bc-lee.

Commits

b74a22d v4.3.0
cc899de Merge pull request #3507 from bc-lee/dart-fix
2a0bcea Downgrade Dart SDK version installed in the CI
f1cc7a4 Make Dart pre-commit hook compatible with the latest Dart SDKs
72a3b71 Merge pull request #3504 from pre-commit/pre-commit-ci-update-config
c8925a4 [pre-commit.ci] pre-commit autoupdate
a5fe6c5 Merge pull request #3496 from ericphanson/eph/jl-startup
6f1f433 Julia language: skip startup.jl file
c681721 Merge pull request #3499 from pre-commit/pre-commit-ci-update-config
4fd4537 [pre-commit.ci] pre-commit autoupdate
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Updates pytest-cov from 6.1.1 to 6.2.1

Changelog

Sourced from pytest-cov's changelog.

6.2.1 (2025-06-12)

Added a version requirement for pytest's pluggy dependency (1.2.0, released 2023-06-21) that has the required new-style hookwrapper API.

Removed deprecated license classifier (packaging).

Disabled coverage warnings in two more situations where they have no value:

"module-not-measured" in workers

"already-imported" in subprocesses

6.2.0 (2025-06-11)

The plugin now adds 3 rules in the filter warnings configuration to prevent common coverage warnings being raised as obscure errors::

default:unclosed database in <sqlite3.Connection object at:ResourceWarning once::PytestCovWarning once::CoverageWarning

This fixes most of the bad interactions that are occurring on pytest 8.4 with filterwarnings=error.

The plugin will check if there already matching rules for the 3 categories (ResourceWarning, PytestCovWarning, CoverageWarning) and message (unclosed database in <sqlite3.Connection object at) before adding the filters.

This means you can have this in your pytest configuration for complete oblivion (not recommended, if that is not clear)::

filterwarnings = [ "error", "ignore:unclosed database in <sqlite3.Connection object at:ResourceWarning", "ignore::PytestCovWarning", "ignore::CoverageWarning", ]

Commits

55dbe43 Bump version: 6.2.0 → 6.2.1
d17e9b7 Update changelog.
8964ab7 Add a note for this warning disable.
e932e41 Prevent unimported warnings @ pytest-xdist workers
573379b Bring pytest-cov's suprocess management in line with coverage's process_start...
f1884e8 Fix xdist pin.
512c669 Added minium version requirements for pluggin (for new-style hookwrappers). P...
629ba64 Remove deprecated license classifier.
dca5723 Bump version: 6.1.1 → 6.2.0
f69166a Also trigger the sqlite warning.
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Updates pytest from 8.3.5 to 8.4.1

Release notes

Sourced from pytest's releases.

8.4.1

pytest 8.4.1 (2025-06-17)

Bug fixes

#13461: Corrected _pytest.terminal.TerminalReporter.isatty to support being called as a method. Before it was just a boolean which could break correct code when using -o log_cli=true).

#13477: Reintroduced pytest.PytestReturnNotNoneWarning{.interpreted-text role="class"} which was removed by accident in pytest [8.4]{.title-ref}.

This warning is raised when a test functions returns a value other than None, which is often a mistake made by beginners.

See return-not-none{.interpreted-text role="ref"} for more information.

#13497: Fixed compatibility with Twisted 25+.

Improved documentation

#13492: Fixed outdated warning about faulthandler not working on Windows.

8.4.0

pytest 8.4.0 (2025-06-02)

Removals and backward incompatible breaking changes

#11372: Async tests will now fail, instead of warning+skipping, if you don't have any suitable plugin installed.

#12346: Tests will now fail, instead of raising a warning, if they return any value other than None.

#12874: We dropped support for Python 3.8 following its end of life (2024-10-07).

#12960: Test functions containing a yield now cause an explicit error. They have not been run since pytest 4.0, and were previously marked as an expected failure and deprecation warning.

See the docs <yield tests deprecated>{.interpreted-text role="ref"} for more information.

Deprecations (removal in next major release)

#10839: Requesting an asynchronous fixture without a [pytest_fixture_setup]{.title-ref} hook that resolves it will now give a DeprecationWarning. This most commonly happens if a sync test requests an async fixture. This should have no effect on a majority of users with async tests or fixtures using async pytest plugins, but may affect non-standard hook setups or autouse=True. For guidance on how to work around this warning see sync-test-async-fixture{.interpreted-text role="ref"}.

New features

#11538: Added pytest.RaisesGroup{.interpreted-text role="class"} as an equivalent to pytest.raises{.interpreted-text role="func"} for expecting ExceptionGroup{.interpreted-text role="exc"}. Also adds pytest.RaisesExc{.interpreted-text role="class"} which is now the logic behind pytest.raises{.interpreted-text role="func"} and used as parameter to pytest.RaisesGroup{.interpreted-text role="class"}. RaisesGroup includes the ability to specify multiple different expected exceptions, the structure of nested exception groups, and flags for emulating except* <except_star>{.interpreted-text role="ref"}. See assert-matching-exception-groups{.interpreted-text role="ref"} and docstrings for more information.

#12081: Added capteesys{.interpreted-text role="fixture"} to capture AND pass output to next handler set by --capture=.

#12504: pytest.mark.xfail{.interpreted-text role="func"} now accepts pytest.RaisesGroup{.interpreted-text role="class"} for the raises parameter when you expect an exception group. You can also pass a pytest.RaisesExc{.interpreted-text role="class"} if you e.g. want to make use of the check parameter.

#12713: New [--force-short-summary]{.title-ref} option to force condensed summary output regardless of verbosity level.

... (truncated)

Commits

8d99211 Prepare release version 8.4.1
5dc5880 docs: update pytest.ini addopts example to use separate -p entries (#13529) (...
d0c7ed0 Reintroduce PytestReturnNotNoneWarning (#13495) (#13527)
a1b3a78 Fix compatibility with Twisted 25 (#13502) (#13531)
4c161ab pytester: avoid unraisableexception gc collects in inline runs to speed up te...
a86ee09 Fix typo in parametrize.rst (#13514) (#13516)
1a0581b Remove outdated warning about faulthandler_timeout on Windows (#13492) (#13493)
4e631a7 Merge pull request #13486 from hosmir/fixtypo (#13487)
b49745e fix: support TerminalReporter.isatty being called (#13462) (#13483)
cc5ceed RELEASING: remove pytest mailing list (#13472) (#13473)
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Updates rich from 14.0.0 to 14.1.0

Changelog

Sourced from rich's changelog.

[14.1.0] - 2025-06-25

Changed

Removed typing_extensions from runtime dependencies Textualize/rich#3763

Live objects (including Progress) may now be nested Textualize/rich#3768

Added padding property to Syntax which returns a tuple of four integers Textualize/rich#3782

Fixed

Fixed extraction of recursive exceptions Textualize/rich#3772

Fixed padding applied to Syntax Textualize/rich#3782

Fixed Panel title missing the panel background style Textualize/rich#3569

Added

Added TTY_INTERACTIVE environment variable to force interactive mode off or on Textualize/rich#3777

Commits

2dca1b7 Merge pull request #3808 from Textualize/bump1410
19b6ddd version bump
a75a9a9 Merge pull request #3807 from Textualize/optimize-options
9a08a2d optimize size
9c9b011 Merge pull request #3680 from Textualize/willmcgugan-patch-1
56855a6 Update bug_report.md
fa9ce3c Merge pull request #3692 from smacke/null-tb-offset-fix
e0c7e96 Merge pull request #3783 from Textualize/live-typing
81b1255 Self typing
21b3800 Merge pull request #3718 from TomJGooding/fix-panel-fix-title-missing-panel-b...
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Updates ruff from 0.11.12 to 0.12.8

Changelog

Sourced from ruff's changelog.

0.12.8

Preview features

[flake8-use-pathlib] Expand PTH201 to check all PurePath subclasses (#19440)

Bug fixes

[flake8-blind-except] Change BLE001 to correctly parse exception tuples (#19747)

[flake8-errmsg] Exclude typing.cast from EM101 (#19656)

[flake8-simplify] Fix raw string handling in SIM905 for embedded quotes (#19591)

[flake8-import-conventions] Avoid false positives for NFKC-normalized __debug__ import aliases in ICN001 (#19411)

[isort] Fix syntax error after docstring ending with backslash (I002) (#19505)

[pylint] Mark PLC0207 fixes as unsafe when *args unpacking is present (#19679)

[pyupgrade] Prevent infinite loop with I002 (UP010, UP035) (#19413)

[ruff] Parenthesize generator expressions in f-strings (RUF010) (#19434)

Rule changes

[eradicate] Don't flag pyrefly pragmas as unused code (ERA001) (#19731)

Documentation

Replace "associative" with "commutative" in docs for RUF036 (#19706)

Fix copy and line separator colors in dark mode (#19630)

Fix link to typing documentation (#19648)

[refurb] Make more examples error out-of-the-box (#19695,#19673,#19672)

Other changes

Include column numbers in GitLab output format (#19708)

Always expand tabs to four spaces in diagnostics (#19618)

Update pre-commit's ruff id (#19654)

0.12.7

This is a follow-up release to 0.12.6. Because of an issue in the package metadata, 0.12.6 failed to publish fully to PyPI and has been yanked. Similarly, there is no GitHub release or Git tag for 0.12.6. The contents of the 0.12.7 release are identical to 0.12.6, except for the updated metadata.

0.12.6

Preview features

[flake8-commas] Add support for trailing comma checks in type parameter lists (COM812, COM819) (#19390)

[pylint] Implement auto-fix for missing-maxsplit-arg (PLC0207) (#19387)

[ruff] Offer fixes for RUF039 in more cases (#19065)

Bug fixes

Support .pyi files in ruff analyze graph (#19611)

[flake8-pyi] Preserve inline comment in ellipsis removal (PYI013) (#19399)

... (truncated)

Commits

f51a228 Bump 0.12.8 (#19813)
d5e1b79 [ty] Fix static assertion size check (#19814)
7dfde3b Update Rust toolchain to 1.89 (#19807)
b22586f [ty] Add ty.inlayHints.variableTypes server option (#19780)
c401a6d [ty] Add failing tests for tuple subclasses (#19803)
7b6abfb [ty] Add ty.experimental.rename server setting (#19800)
b005cdb [ty] Implemented support for "rename" language server feature (#19551)
b96aa46 [ty] Reduce size of member table (#19572)
cc97579 [ty] Move server capabilities creation (#19798)
ef1802b [ty] Repurpose FunctionType.into_bound_method_type to return `BoundMethodTy...
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Updates safetensors from 0.5.3 to 0.6.2

Release notes

Sourced from safetensors's releases.

v0.6.2

What's Changed

Fixing clippy in 1.89 by @Narsil in huggingface/safetensors#644

Fixing the version check for uint support in torch. by @Narsil in huggingface/safetensors#643

Full Changelog: huggingface/safetensors@v0.6.1...v0.6.2

v0.6.1

What's Changed

Rust release upgrade (cache v1 is discontinued). by @Narsil in huggingface/safetensors#627

Re-adding support for u16, u32, u64. by @Narsil in huggingface/safetensors#629

Adding _safe_open_handle. by @Narsil in huggingface/safetensors#608

Fix test_simple.py for 0.6.0 by @xanderlent in huggingface/safetensors#634

GH action... once again. by @Narsil in huggingface/safetensors#635

Preparing for patch 6.0.1. by @Narsil in huggingface/safetensors#638

New Contributors

@xanderlent made their first contribution in huggingface/safetensors#634

Full Changelog: huggingface/safetensors@v0.6.0...v0.6.1

v0.6.1-rc0

What's Changed

Rust release upgrade (cache v1 is discontinued). by @Narsil in huggingface/safetensors#627

Re-adding support for u16, u32, u64. by @Narsil in huggingface/safetensors#629

Adding _safe_open_handle. by @Narsil in huggingface/safetensors#608

Fix test_simple.py for 0.6.0 by @xanderlent in huggingface/safetensors#634

GH action... once again. by @Narsil in huggingface/safetensors#635

Preparing for patch 6.0.1. by @Narsil in huggingface/safetensors#638

New Contributors

@xanderlent made their first contribution in huggingface/safetensors#634

Full Changelog: huggingface/safetensors@v0.6.0...v0.6.1-rc0

v0.6.0

Biggest changes

Added support for FP4/FP6 https://www.opencompute.org/documents/ocp-microscaling-formats-mx-v1-0-spec-final-pdf Support is still nascent in most frameworks (will require torch 2.8 which isn't released yet, and that will only support fp4 with caveats), however being an openspec supported by hardware manufacturers (and therefore hardware support most likely), it fits the bill of implementing it in safetensors (rather than all custom quantized formats existing in the wild in various frameworks.

What FP4/FP6 mean, is that now a element of a tensor may have a non byte-aligned s...
Description has been truncated

Bumps the python-requirements group with 14 updates in the /envs directory: | Package | From | To | | --- | --- | --- | | [simpleitk](https://github.com/SimpleITK/SimpleITK) | `2.5.0` | `2.5.2` | | [coverage](https://github.com/nedbat/coveragepy) | `7.8.2` | `7.10.3` | | [jupyterlab](https://github.com/jupyterlab/jupyterlab) | `4.4.3` | `4.4.5` | | [monai](https://github.com/Project-MONAI/MONAI) | `1.4.0` | `1.5.0` | | [pandas](https://github.com/pandas-dev/pandas) | `2.2.3` | `2.3.1` | | [plotly](https://github.com/plotly/plotly.py) | `6.1.2` | `6.2.0` | | [pre-commit](https://github.com/pre-commit/pre-commit) | `4.2.0` | `4.3.0` | | [pytest-cov](https://github.com/pytest-dev/pytest-cov) | `6.1.1` | `6.2.1` | | [pytest](https://github.com/pytest-dev/pytest) | `8.3.5` | `8.4.1` | | [rich](https://github.com/Textualize/rich) | `14.0.0` | `14.1.0` | | [ruff](https://github.com/astral-sh/ruff) | `0.11.12` | `0.12.8` | | [safetensors](https://github.com/huggingface/safetensors) | `0.5.3` | `0.6.2` | | [timm](https://github.com/huggingface/pytorch-image-models) | `1.0.15` | `1.0.19` | | [wandb](https://github.com/wandb/wandb) | `0.19.11` | `0.21.1` | Updates `simpleitk` from 2.5.0 to 2.5.2 - [Commits](SimpleITK/SimpleITK@v2.5.0...v2.5.2) Updates `coverage` from 7.8.2 to 7.10.3 - [Release notes](https://github.com/nedbat/coveragepy/releases) - [Changelog](https://github.com/nedbat/coveragepy/blob/master/CHANGES.rst) - [Commits](coveragepy/coveragepy@7.8.2...7.10.3) Updates `jupyterlab` from 4.4.3 to 4.4.5 - [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/RELEASE.md) - [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/lsp@4.4.3...@jupyterlab/lsp@4.4.5) Updates `monai` from 1.4.0 to 1.5.0 - [Release notes](https://github.com/Project-MONAI/MONAI/releases) - [Changelog](https://github.com/Project-MONAI/MONAI/blob/dev/CHANGELOG.md) - [Commits](Project-MONAI/MONAI@1.4.0...1.5.0) Updates `pandas` from 2.2.3 to 2.3.1 - [Commits](pandas-dev/pandas@v2.2.3...v2.3.1) Updates `plotly` from 6.1.2 to 6.2.0 - [Release notes](https://github.com/plotly/plotly.py/releases) - [Changelog](https://github.com/plotly/plotly.py/blob/main/CHANGELOG.md) - [Commits](plotly/plotly.py@v6.1.2...v6.2.0) Updates `pre-commit` from 4.2.0 to 4.3.0 - [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md) - [Commits](pre-commit/pre-commit@v4.2.0...v4.3.0) Updates `pytest-cov` from 6.1.1 to 6.2.1 - [Changelog](https://github.com/pytest-dev/pytest-cov/blob/master/CHANGELOG.rst) - [Commits](pytest-dev/pytest-cov@v6.1.1...v6.2.1) Updates `pytest` from 8.3.5 to 8.4.1 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@8.3.5...8.4.1) Updates `rich` from 14.0.0 to 14.1.0 - [Changelog](https://github.com/Textualize/rich/blob/master/CHANGELOG.md) - [Commits](Textualize/rich@v14.0.0...v14.1.0) Updates `ruff` from 0.11.12 to 0.12.8 - [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md) - [Commits](astral-sh/ruff@0.11.12...0.12.8) Updates `safetensors` from 0.5.3 to 0.6.2 - [Release notes](https://github.com/huggingface/safetensors/releases) - [Changelog](https://github.com/huggingface/safetensors/blob/main/RELEASE.md) - [Commits](huggingface/safetensors@v0.5.3...v0.6.2) Updates `timm` from 1.0.15 to 1.0.19 - [Commits](huggingface/pytorch-image-models@v1.0.15...v1.0.19) Updates `wandb` from 0.19.11 to 0.21.1 - [Changelog](https://github.com/wandb/wandb/blob/main/CHANGELOG.md) - [Commits](wandb/wandb@v0.19.11...v0.21.1) --- updated-dependencies: - dependency-name: simpleitk dependency-version: 2.5.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-requirements - dependency-name: coverage dependency-version: 7.10.3 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: jupyterlab dependency-version: 4.4.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-requirements - dependency-name: monai dependency-version: 1.5.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: pandas dependency-version: 2.3.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: plotly dependency-version: 6.2.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: pre-commit dependency-version: 4.3.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: pytest-cov dependency-version: 6.2.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: pytest dependency-version: 8.4.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: rich dependency-version: 14.1.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: ruff dependency-version: 0.12.8 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: safetensors dependency-version: 0.6.2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements - dependency-name: timm dependency-version: 1.0.19 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: python-requirements - dependency-name: wandb dependency-version: 0.21.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-requirements ... Signed-off-by: dependabot[bot] <support@github.com>

dependabot · 2025-09-05T14:18:44Z

Looks like these dependencies are updatable in another way, so this is no longer needed.

dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update python code labels Aug 12, 2025

dependabot bot closed this Sep 5, 2025

dependabot bot deleted the dependabot/pip/envs/python-requirements-b036d8f2d4 branch September 5, 2025 14:18

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Bump the python-requirements group across 1 directory with 14 updates #21

Bump the python-requirements group across 1 directory with 14 updates #21

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Bump the python-requirements group across 1 directory with 14 updates #21

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Version 7.10.3 — 2025-08-10

Version 7.10.2 — 2025-08-03

Version 7.10.1 — 2025-07-27

1.5.0

Added

Fixed

Changed

[1.5.0] - 2025-06-13

What's Changed

Added

Fixed

Changed

v6.2.0

Added

Fixed

Changed

[6.2.0] - 2025-06-26

Added

Fixed

Changed

4.3.0 - 2025-08-09

Features

6.2.1 (2025-06-12)

6.2.0 (2025-06-11)

8.4.1

pytest 8.4.1 (2025-06-17)

Bug fixes

Improved documentation

8.4.0

pytest 8.4.0 (2025-06-02)

Removals and backward incompatible breaking changes

Deprecations (removal in next major release)

New features

[14.1.0] - 2025-06-25

Changed

Fixed

Added

0.12.8

Preview features

Bug fixes

Rule changes

Documentation

Other changes

0.12.7

0.12.6

Preview features

Bug fixes

v0.6.2

What's Changed

v0.6.1

What's Changed

New Contributors

v0.6.1-rc0

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v0.6.0

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