Introduction

Measures the shape properties of the object boundaries and displays the curvature.

Original author: Dr. Meghan Driscoll
Vectorized and compacted/concised a complicated codebase by Dr. Preetham Manjunatha.

Thanks to Dr. Meghan Driscoll who kindly shared her code for academic purpose. If you use this code for visualization and other academic/research/any purposes.

Please cite:

Reference: Driscoll MK, McCann C, Kopace R, Homan T, Fourkas JT, Parent C, et al. (2012) Cell Shape Dynamics: From Waves to Migration. PLoS Comput Biol 8(3): e1002392. https://doi.org/10.1371/journal.pcbi.1002392

Important note: This code initially used a parfor to speed up the things. Now it has been vectorized for fast calculations.

Quick Pipeline Visualization

Example: Curvature visualization

Blob

T-section

Requirements

MATLAB

Feedback

Please rate and provide feedback for the further improvements.