A tool to predict missing data in sparsely sampled genotype-phenotype maps
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Aug 18, 2023 - Python
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genotype-phenotype-map
Here are 8 public repositories matching this topic...
Tool for genome wide association studies with Bayesian inference and statistical learning
machine-learning bioinformatics gwas random-forest snp bayesian-inference gwas-pipeline genotype-phenotype-map gwas-tools
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Sep 30, 2021 - R
Evolving soft robots using AutoMap genotype-phenotype mapping
machine-learning evolution scientific-computing scientific-publications evolutionary-computation genotype-phenotype-map
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Apr 11, 2018 - Python
Genotype-phenotype Association Predictor
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May 9, 2025 - R
Writeup of automatic evolvable G-P mapping for GECCO 2018
machine-learning evolution scientific-computing scientific-publications evolutionary-computation genotype-phenotype-map
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Apr 15, 2018 - TeX
Streamlined toolkit for predicting human phenotypes from UK Biobank using tree-based ensembles and linear models. Load high-dimensional SNP and covariate data, select variants via Random Feature Selection to balance accuracy and runtime, and interpret genetic plus socio-demographic feature contributions with SHAP.
python machine-learning genomics data-visualization classification hyperparameter-tuning uk-biobank precision-medicine genotype-phenotype-map demographics-data tree-based-models sociodemographic
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Jul 1, 2025 - Python
Supplementary code and data for "The paradox of predictability"
time-series-analysis quantitative-genetics phylogenetic-comparative-methods genotype-phenotype-map macroevolution evolvability phenotypic-integration evolutionary-prediction
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Aug 11, 2024 - R
Code for project on RNA phenotypic plasticity as a response to evolutionary dynamics of periodically switching enviornments.
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Sep 8, 2025 - Jupyter Notebook
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