This repository contains scripts for the 'Spatially resolved translational dysregulation in brain cell types of Grin2a+/- mouse model of schizophrenia'.
preprocessing(filtering, integration, cell-type classification, tissue region identification, and grid quantification)downsteam analysis(cNMF, DE analysis, GSEA, Basal Grin2a correlation, and co-variation)
Please refer to the README.md files under each subfolder for more detailed information.
Please cite our paper if you find our work useful.:
TBA
Contact us at jiahao@broadinstitute.org if you have any issues.
Jiahao Huang, Mingrui Wu